Analysis of interatomic Contacts of Structural Units in PDB entry:
1WS6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WS6 entry

There is 1 chain in PDB entry 1WS6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 15VAL 185
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1WS6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
20 24Right-handed 310
Helix 2
2
A
38 53Right-handed alpha
Helix 3
3
A
67 76Right-handed alpha
Helix 4
4
A
86 101Right-handed alpha
Helix 5
5
A
110 121Right-handed alpha
Helix 6
6
A
139 149Right-handed alpha
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There are 2 sheets in PDB entry 1WS6. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
16 17first strand
Strand 2
A
27 28anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
105 107first strand
Strand 2
A
79 83parallel
Strand 3
A
58 62parallel
Strand 4
A
125 130parallel
Strand 5
A
151 162parallel
Strand 6
A
178 184anti-parallel
Strand 7
A
171 175anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il