Analysis of interatomic Contacts of Structural Units in PDB entry:
1WSU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WSU entry

There are 7 chains in PDB entry 1WSU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
G 13 C 35
F
G 13 C 35
G
G 13 C 35
A
GLY 511ASN 634
B
GLY 511VAL 632
C
LYS 517VAL 632
D
SER 512ASN 634
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1WSU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
514 530Right-handed alpha
Helix 2
2
A
535 544Right-handed alpha
Helix 3
3
A
546 560Right-handed alpha
Helix 4
4
A
574 588Right-handed alpha
Helix 5
5
A
589 591Right-handed 310
Helix 6
6
A
594 603Right-handed alpha
Helix 7
7
A
605 619Right-handed alpha
Helix 8
8
B
511 530Right-handed alpha
Helix 9
9
B
535 544Right-handed alpha
Helix 10
10
B
546 560Right-handed alpha
Helix 11
11
B
574 589Right-handed alpha
Helix 12
12
B
594 603Right-handed alpha
Helix 13
13
B
605 619Right-handed alpha
Helix 14
14
C
517 530Right-handed alpha
Helix 15
15
C
535 540Right-handed alpha
Helix 16
16
C
553 560Right-handed alpha
Helix 17
17
C
574 588Right-handed alpha
Helix 18
18
C
589 591Right-handed 310
Helix 19
19
C
594 603Right-handed alpha
Helix 20
20
C
605 619Right-handed alpha
Helix 21
21
D
512 517Right-handed alpha
Helix 22
22
D
518 530Right-handed alpha
Helix 23
23
D
535 544Right-handed alpha
Helix 24
24
D
546 560Right-handed alpha
Helix 25
25
D
574 587Right-handed alpha
Helix 26
26
D
594 602Right-handed alpha
Helix 27
27
D
605 619Right-handed alpha
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There are 8 sheets in PDB entry 1WSU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
563 565first strand
Strand 2
A
571 573anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
622 625first strand
Strand 2
A
628 631anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
563 565first strand
Strand 2
B
571 573anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
622 625first strand
Strand 2
B
628 631anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
563 565first strand
Strand 2
C
571 573anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
622 623first strand
Strand 2
C
630 631anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
563 565first strand
Strand 2
D
571 573anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
622 623first strand
Strand 2
D
630 631anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il