Analysis of interatomic Contacts of Structural Units in PDB entry:
1WXQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WXQ entry

There is 1 chain in PDB entry 1WXQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1VAL 395
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1WXQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 22Right-handed alpha
Helix 2
2
A
126 148Right-handed alpha
Helix 3
3
A
150 155Right-handed alpha
Helix 4
4
A
163 172Right-handed alpha
Helix 5
5
A
173 176Right-handed 310
Helix 6
6
A
178 189Right-handed alpha
Helix 7
7
A
194 198Right-handed 310
Helix 8
8
A
199 215Right-handed alpha
Helix 9
9
A
224 227Right-handed 310
Helix 10
10
A
228 242Right-handed alpha
Helix 11
11
A
250 259Right-handed alpha
Helix 12
12
A
290 297Right-handed alpha
Helix 13
13
A
304 315Right-handed alpha
Helix 14
14
A
350 359Right-handed alpha
Helix 15
15
A
359 365Right-handed alpha
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There are 3 sheets in PDB entry 1WXQ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 47first strand
Strand 2
A
68 77anti-parallel
Strand 3
A
64 65anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 47first strand
Strand 2
A
68 77anti-parallel
Strand 3
A
2 7parallel
Strand 4
A
104 110parallel
Strand 5
A
217 222parallel
Strand 6
A
245 249parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 346first strand
Strand 2
A
319 325anti-parallel
Strand 3
A
388 394parallel
Strand 4
A
366 371anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il