Analysis of interatomic Contacts of Structural Units in PDB entry:
1WZY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WZY entry

There is 1 chain in PDB entry 1WZY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 8GLY 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1WZY. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
61 78Right-handed alpha
Helix 2
2
A
112 119Right-handed alpha
Helix 3
3
A
122 143Right-handed alpha
Helix 4
4
A
175 179Right-handed 310
Helix 5
5
A
195 201Right-handed alpha
Helix 6
6
A
207 224Right-handed alpha
Helix 7
7
A
232 245Right-handed alpha
Helix 8
8
A
248 255Right-handed alpha
Helix 9
9
A
257 267Right-handed alpha
Helix 10
10
A
274 278Right-handed 310
Helix 11
11
A
283 294Right-handed alpha
Helix 12
12
A
303 310Right-handed alpha
Helix 13
13
A
311 314Right-handed 310
Helix 14
14
A
318 322Right-handed 310
Helix 15
15
A
339 352Right-handed alpha
Helix 16
16
A
353 355Right-handed 310
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There are 4 sheets in PDB entry 1WZY. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
12 13first strand
Strand 2
A
18 19anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
25 32first strand
Strand 2
A
38 44anti-parallel
Strand 3
A
49 56anti-parallel
Strand 4
A
101 106anti-parallel
Strand 5
A
86 90anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
110 111first strand
Strand 2
A
155 157anti-parallel
Strand 3
A
163 165anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
145 146first strand
Strand 2
A
172 173anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il