Analysis of interatomic Contacts of Structural Units in PDB entry:
1X1T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1X1T entry

There is 1 chain in PDB entry 1X1T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1ARG 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 1X1T. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
38 54Right-handed alpha
Helix 3
3
A
66 82Right-handed alpha
Helix 4
4
A
98 102Right-handed 310
Helix 5
5
A
103 115Right-handed alpha
Helix 6
6
A
115 133Right-handed alpha
Helix 7
7
A
142 146Right-handed 310
Helix 8
8
A
152 174Right-handed alpha
Helix 9
9
A
215 220Right-handed alpha
Helix 10
10
A
227 240Right-handed alpha
Helix 11
11
A
241 244Right-handed 310
Helix 12
12
A
256 260Right-handed 310
Back to top of page

There is 1 sheet ( A) in PDB entry 1X1T.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
57 60first strand
Strand 2
A
30 34parallel
Strand 3
A
6 9parallel
Strand 4
A
86 89parallel
Strand 5
A
135 140parallel
Strand 6
A
178 185parallel
Strand 7
A
250 253parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il