Analysis of interatomic Contacts of Structural Units in PDB entry:
1XDZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XDZ entry

There is 1 chain in PDB entry 1XDZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 0GLU 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1XDZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 13Right-handed alpha
Helix 2
2
A
18 39Right-handed alpha
Helix 3
3
A
46 54Right-handed alpha
Helix 4
4
A
54 60Right-handed alpha
Helix 5
5
A
61 64Right-handed 310
Helix 6
6
A
66 70Right-handed 310
Helix 7
7
A
83 91Right-handed alpha
Helix 8
8
A
102 117Right-handed alpha
Helix 9
9
A
127 132Right-handed alpha
Helix 10
10
A
151 160Right-handed alpha
Helix 11
11
A
177 191Right-handed alpha
Helix 12
12
A
230 235Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1XDZ.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 125first strand
Strand 2
A
95 100parallel
Strand 3
A
72 76parallel
Strand 4
A
141 147parallel
Strand 5
A
163 173parallel
Strand 6
A
209 217anti-parallel
Strand 7
A
193 202anti-parallel
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