Analysis of interatomic Contacts of Structural Units in PDB entry:
1Y2C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Y2C entry

There are 2 chains in PDB entry 1Y2C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 86PRO 411
B
THR 86PRO 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 1Y2C. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
86 96Right-handed alpha
Helix 2
2
A
97 99Right-handed 310
Helix 3
3
A
105 113Right-handed alpha
Helix 4
4
A
116 129Right-handed alpha
Helix 5
5
A
130 135Right-handed alpha
Helix 6
6
A
138 152Right-handed alpha
Helix 7
7
A
161 177Right-handed alpha
Helix 8
8
A
178 182Right-handed 310
Helix 9
9
A
186 200Right-handed alpha
Helix 10
10
A
208 215Right-handed alpha
Helix 11
11
A
217 224Right-handed alpha
Helix 12
12
A
227 240Right-handed alpha
Helix 13
13
A
241 243Right-handed 310
Helix 14
14
A
253 270Right-handed alpha
Helix 15
15
A
271 274Right-handed 310
Helix 16
16
A
275 289Right-handed alpha
Helix 17
17
A
302 319Right-handed alpha
Helix 18
18
A
320 324Right-handed 310
Helix 19
19
A
325 350Right-handed alpha
Helix 20
20
A
364 376Right-handed alpha
Helix 21
21
A
376 388Right-handed alpha
Helix 22
22
A
392 409Right-handed alpha
Helix 23
23
B
86 97Right-handed alpha
Helix 24
24
B
105 113Right-handed alpha
Helix 25
25
B
116 129Right-handed alpha
Helix 26
26
B
130 135Right-handed alpha
Helix 27
27
B
138 152Right-handed alpha
Helix 28
28
B
161 177Right-handed alpha
Helix 29
29
B
178 182Right-handed 310
Helix 30
30
B
186 200Right-handed alpha
Helix 31
31
B
208 215Right-handed alpha
Helix 32
32
B
217 224Right-handed alpha
Helix 33
33
B
227 240Right-handed alpha
Helix 34
34
B
241 243Right-handed 310
Helix 35
35
B
253 270Right-handed alpha
Helix 36
36
B
271 274Right-handed 310
Helix 37
37
B
275 289Right-handed alpha
Helix 38
38
B
302 319Right-handed alpha
Helix 39
39
B
320 324Right-handed 310
Helix 40
40
B
325 350Right-handed alpha
Helix 41
41
B
364 376Right-handed alpha
Helix 42
42
B
376 388Right-handed alpha
Helix 43
43
B
392 410Right-handed alpha
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There are no sheets in PDB entry 1Y2C

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