Analysis of interatomic Contacts of Structural Units in PDB entry:
1Y67


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Y67 entry

There are 4 chains in PDB entry 1Y67 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1VAL 213
B
 ALA 1LYS 211
C
 ALA 2VAL 213
D
 ALA 2ARG 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 1Y67. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 30Right-handed alpha
Helix 2
2
A
30 44Right-handed alpha
Helix 3
3
A
52 57Right-handed alpha
Helix 4
4
A
64 87Right-handed alpha
Helix 5
5
A
101 113Right-handed alpha
Helix 6
6
A
114 129Right-handed alpha
Helix 7
7
A
154 157Right-handed 310
Helix 8
8
A
158 163Right-handed alpha
Helix 9
9
A
175 178Right-handed 310
Helix 10
10
A
179 184Right-handed alpha
Helix 11
11
A
186 195Right-handed alpha
Helix 12
12
A
199 212Right-handed alpha
Helix 13
13
B
20 30Right-handed alpha
Helix 14
14
B
30 44Right-handed alpha
Helix 15
15
B
52 57Right-handed alpha
Helix 16
16
B
67 87Right-handed alpha
Helix 17
17
B
101 113Right-handed alpha
Helix 18
18
B
114 128Right-handed alpha
Helix 19
19
B
154 157Right-handed 310
Helix 20
20
B
158 163Right-handed alpha
Helix 21
21
B
175 178Right-handed 310
Helix 22
22
B
179 184Right-handed alpha
Helix 23
23
B
186 195Right-handed alpha
Helix 24
24
B
199 211Right-handed alpha
Helix 25
25
C
20 30Right-handed alpha
Helix 26
26
C
30 44Right-handed alpha
Helix 27
27
C
52 57Right-handed alpha
Helix 28
28
C
64 87Right-handed alpha
Helix 29
29
C
101 113Right-handed alpha
Helix 30
30
C
114 129Right-handed alpha
Helix 31
31
C
154 157Right-handed 310
Helix 32
32
C
158 163Right-handed alpha
Helix 33
33
C
175 178Right-handed 310
Helix 34
34
C
179 184Right-handed alpha
Helix 35
35
C
186 195Right-handed alpha
Helix 36
36
C
199 212Right-handed alpha
Helix 37
37
D
20 30Right-handed alpha
Helix 38
38
D
30 44Right-handed alpha
Helix 39
39
D
52 57Right-handed alpha
Helix 40
40
D
64 66Right-handed 310
Helix 41
41
D
67 87Right-handed alpha
Helix 42
42
D
101 113Right-handed alpha
Helix 43
43
D
114 129Right-handed alpha
Helix 44
44
D
154 157Right-handed 310
Helix 45
45
D
158 163Right-handed alpha
Helix 46
46
D
175 178Right-handed 310
Helix 47
47
D
179 184Right-handed alpha
Helix 48
48
D
186 195Right-handed alpha
Helix 49
49
D
196 198Right-handed 310
Helix 50
50
D
199 211Right-handed alpha
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There are 4 sheets in PDB entry 1Y67. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 150first strand
Strand 2
A
133 140anti-parallel
Strand 3
A
167 173anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 150first strand
Strand 2
A
133 140anti-parallel
Strand 3
A
167 173anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 150first strand
Strand 2
A
133 140anti-parallel
Strand 3
A
167 173anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 150first strand
Strand 2
A
133 140anti-parallel
Strand 3
A
167 173anti-parallel
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