Analysis of interatomic Contacts of Structural Units in PDB entry:
1YYH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1YYH entry

There are 2 chains in PDB entry 1YYH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 52LEU 244
B
ARG 55ASP 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 1YYH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
59 67Right-handed alpha
Helix 2
2
A
69 79Right-handed alpha
Helix 3
3
A
92 101Right-handed alpha
Helix 4
4
A
102 112Right-handed alpha
Helix 5
5
A
126 135Right-handed alpha
Helix 6
6
A
138 146Right-handed alpha
Helix 7
7
A
159 168Right-handed alpha
Helix 8
8
A
169 179Right-handed alpha
Helix 9
9
A
192 201Right-handed alpha
Helix 10
10
A
202 212Right-handed alpha
Helix 11
11
A
225 233Right-handed alpha
Helix 12
12
A
235 244Right-handed alpha
Helix 13
13
B
59 67Right-handed alpha
Helix 14
14
B
69 79Right-handed alpha
Helix 15
15
B
92 101Right-handed alpha
Helix 16
16
B
102 112Right-handed alpha
Helix 17
17
B
126 135Right-handed alpha
Helix 18
18
B
138 146Right-handed alpha
Helix 19
19
B
159 168Right-handed alpha
Helix 20
20
B
169 179Right-handed alpha
Helix 21
21
B
192 201Right-handed alpha
Helix 22
22
B
202 212Right-handed alpha
Helix 23
23
B
225 233Right-handed alpha
Helix 24
24
B
235 243Right-handed alpha
Back to top of page
There are no sheets in PDB entry 1YYH

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il