Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z10


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z10 entry

There are 4 chains in PDB entry 1Z10 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 30ARG 494
B
 LYS 32HIS 496
C
 GLY 31ARG 494
D
 GLY 31ARG 494
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 83 helices in PDB entry 1Z10. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 49Right-handed 310
Helix 2
2
A
50 52Right-handed 310
Helix 3
3
A
53 66Right-handed alpha
Helix 4
4
A
83 92Right-handed alpha
Helix 5
5
A
104 112Right-handed alpha
Helix 6
6
A
120 138Right-handed alpha
Helix 7
7
A
142 163Right-handed alpha
Helix 8
8
A
170 188Right-handed alpha
Helix 9
9
A
195 214Right-handed alpha
Helix 10
10
A
214 228Right-handed alpha
Helix 11
11
A
232 257Right-handed alpha
Helix 12
12
A
266 278Right-handed alpha
Helix 13
13
A
287 302Right-handed alpha
Helix 14
14
A
303 320Right-handed alpha
Helix 15
15
A
320 335Right-handed alpha
Helix 16
16
A
342 348Right-handed 310
Helix 17
17
A
349 364Right-handed alpha
Helix 18
18
A
394 400Right-handed alpha
Helix 19
19
A
412 417Right-handed 310
Helix 20
20
A
441 459Right-handed alpha
Helix 21
21
A
467 471Right-handed 310
Helix 22
22
B
45 49Right-handed 310
Helix 23
23
B
50 52Right-handed 310
Helix 24
24
B
53 66Right-handed alpha
Helix 25
25
B
82 92Right-handed alpha
Helix 26
26
B
104 112Right-handed alpha
Helix 27
27
B
120 138Right-handed alpha
Helix 28
28
B
142 163Right-handed alpha
Helix 29
29
B
170 188Right-handed alpha
Helix 30
30
B
195 212Right-handed alpha
Helix 31
31
B
214 228Right-handed alpha
Helix 32
32
B
232 258Right-handed alpha
Helix 33
33
B
266 279Right-handed alpha
Helix 34
34
B
287 302Right-handed alpha
Helix 35
35
B
303 320Right-handed alpha
Helix 36
36
B
320 335Right-handed alpha
Helix 37
37
B
342 348Right-handed 310
Helix 38
38
B
349 364Right-handed alpha
Helix 39
39
B
394 400Right-handed alpha
Helix 40
40
B
412 417Right-handed 310
Helix 41
41
B
441 459Right-handed alpha
Helix 42
42
B
467 471Right-handed 310
Helix 43
43
C
45 49Right-handed 310
Helix 44
44
C
50 52Right-handed 310
Helix 45
45
C
53 66Right-handed alpha
Helix 46
46
C
82 92Right-handed alpha
Helix 47
47
C
104 112Right-handed alpha
Helix 48
48
C
120 138Right-handed alpha
Helix 49
49
C
142 162Right-handed alpha
Helix 50
50
C
170 188Right-handed alpha
Helix 51
51
C
195 213Right-handed alpha
Helix 52
52
C
214 228Right-handed alpha
Helix 53
53
C
232 259Right-handed alpha
Helix 54
54
C
266 278Right-handed alpha
Helix 55
55
C
287 320Right-handed alpha
Helix 56
56
C
320 335Right-handed alpha
Helix 57
57
C
342 348Right-handed 310
Helix 58
58
C
349 364Right-handed alpha
Helix 59
59
C
394 400Right-handed alpha
Helix 60
60
C
412 417Right-handed 310
Helix 61
61
C
441 459Right-handed alpha
Helix 62
62
C
467 471Right-handed 310
Helix 63
63
D
45 49Right-handed 310
Helix 64
64
D
50 52Right-handed 310
Helix 65
65
D
53 66Right-handed alpha
Helix 66
66
D
82 92Right-handed alpha
Helix 67
67
D
104 112Right-handed alpha
Helix 68
68
D
120 138Right-handed alpha
Helix 69
69
D
142 163Right-handed alpha
Helix 70
70
D
170 188Right-handed alpha
Helix 71
71
D
195 212Right-handed alpha
Helix 72
72
D
214 228Right-handed alpha
Helix 73
73
D
232 258Right-handed alpha
Helix 74
74
D
266 278Right-handed alpha
Helix 75
75
D
287 302Right-handed alpha
Helix 76
76
D
303 320Right-handed alpha
Helix 77
77
D
320 335Right-handed alpha
Helix 78
78
D
342 348Right-handed 310
Helix 79
79
D
349 364Right-handed alpha
Helix 80
80
D
394 400Right-handed alpha
Helix 81
81
D
412 417Right-handed 310
Helix 82
82
D
441 459Right-handed alpha
Helix 83
83
D
467 471Right-handed 310
Back to top of page

There are 16 sheets in PDB entry 1Z10. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
76 81anti-parallel
Strand 3
A
390 393parallel
Strand 4
A
372 373anti-parallel
Strand 5
A
100 101anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 379first strand
Strand 2
A
384 385anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
460 464first strand
Strand 2
A
489 493anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 478first strand
Strand 2
A
482 484anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 73first strand
Strand 2
B
76 81anti-parallel
Strand 3
B
390 393parallel
Strand 4
B
372 373anti-parallel
Strand 5
B
100 101anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
378 380first strand
Strand 2
B
383 385anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
460 464first strand
Strand 2
B
489 493anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
475 478first strand
Strand 2
B
482 484anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
68 73first strand
Strand 2
C
76 81anti-parallel
Strand 3
C
390 393parallel
Strand 4
C
372 373anti-parallel
Strand 5
C
100 101anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
378 380first strand
Strand 2
C
383 385anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
460 464first strand
Strand 2
C
489 493anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
475 478first strand
Strand 2
C
482 484anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
68 73first strand
Strand 2
D
76 81anti-parallel
Strand 3
D
390 393parallel
Strand 4
D
372 373anti-parallel
Strand 5
D
100 101anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
378 380first strand
Strand 2
D
383 385anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
460 464first strand
Strand 2
D
489 493anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
475 478first strand
Strand 2
D
482 484anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il