Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z5C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z5C entry

There are 2 chains in PDB entry 1Z5C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4LEU 469
B
 LYS 4GLU 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 1Z5C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 19Right-handed alpha
Helix 2
2
A
20 24Right-handed 310
Helix 3
3
A
27 46Right-handed alpha
Helix 4
4
A
47 51Right-handed 310
Helix 5
5
A
82 84Right-handed 310
Helix 6
6
A
85 92Right-handed alpha
Helix 7
7
A
110 123Right-handed alpha
Helix 8
8
A
179 198Right-handed alpha
Helix 9
9
A
237 247Right-handed alpha
Helix 10
10
A
253 262Right-handed alpha
Helix 11
11
A
266 278Right-handed alpha
Helix 12
12
A
284 288Right-handed 310
Helix 13
13
A
289 303Right-handed alpha
Helix 14
14
A
318 331Right-handed alpha
Helix 15
15
A
382 385Right-handed 310
Helix 16
16
A
386 395Right-handed alpha
Helix 17
17
A
396 401Right-handed 310
Helix 18
18
A
433 468Right-handed alpha
Helix 19
19
B
11 19Right-handed alpha
Helix 20
20
B
20 24Right-handed 310
Helix 21
21
B
27 46Right-handed alpha
Helix 22
22
B
47 51Right-handed 310
Helix 23
23
B
85 92Right-handed alpha
Helix 24
24
B
110 123Right-handed alpha
Helix 25
25
B
179 198Right-handed alpha
Helix 26
26
B
237 247Right-handed alpha
Helix 27
27
B
253 262Right-handed alpha
Helix 28
28
B
266 277Right-handed alpha
Helix 29
29
B
284 288Right-handed 310
Helix 30
30
B
289 303Right-handed alpha
Helix 31
31
B
310 314Right-handed 310
Helix 32
32
B
318 331Right-handed alpha
Helix 33
33
B
382 385Right-handed 310
Helix 34
34
B
386 395Right-handed alpha
Helix 35
35
B
396 401Right-handed 310
Helix 36
36
B
433 463Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 1Z5C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 9first strand
Strand 2
B
95 96anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 162first strand
Strand 2
A
138 147anti-parallel
Strand 3
A
127 132anti-parallel
Strand 4
A
169 177anti-parallel
Strand 5
A
69 76anti-parallel
Strand 6
A
55 64anti-parallel
Strand 7
A
202 206parallel
Strand 8
A
212 215anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
B
8 9anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 339first strand
Strand 2
A
348 358anti-parallel
Strand 3
A
343 345anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 339first strand
Strand 2
A
348 358anti-parallel
Strand 3
A
409 417anti-parallel
Strand 4
A
369 374parallel
Strand 5
A
377 379anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 162first strand
Strand 2
B
138 147anti-parallel
Strand 3
B
127 132anti-parallel
Strand 4
B
169 177anti-parallel
Strand 5
B
69 76anti-parallel
Strand 6
B
55 64anti-parallel
Strand 7
B
202 206parallel
Strand 8
B
212 215anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 339first strand
Strand 2
B
348 358anti-parallel
Strand 3
B
343 345anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 339first strand
Strand 2
B
348 358anti-parallel
Strand 3
B
409 417anti-parallel
Strand 4
B
369 374parallel
Strand 5
B
377 379anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il