Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z5H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z5H entry

There are 2 chains in PDB entry 1Z5H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 780
B
 MET 1LYS 780
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 1Z5H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
104 108Right-handed 310
Helix 2
2
A
159 163Right-handed 310
Helix 3
3
A
193 211Right-handed alpha
Helix 4
4
A
242 246Right-handed alpha
Helix 5
5
A
252 270Right-handed alpha
Helix 6
6
A
280 282Right-handed 310
Helix 7
7
A
283 303Right-handed alpha
Helix 8
8
A
307 316Right-handed alpha
Helix 9
9
A
316 324Right-handed alpha
Helix 10
10
A
347 366Right-handed alpha
Helix 11
11
A
366 382Right-handed alpha
Helix 12
12
A
387 400Right-handed alpha
Helix 13
13
A
402 413Right-handed alpha
Helix 14
14
A
478 481Right-handed 310
Helix 15
15
A
489 499Right-handed alpha
Helix 16
16
A
500 503Right-handed 310
Helix 17
17
A
504 522Right-handed alpha
Helix 18
18
A
525 534Right-handed alpha
Helix 19
19
A
535 537Right-handed 310
Helix 20
20
A
541 557Right-handed alpha
Helix 21
21
A
562 578Right-handed alpha
Helix 22
22
A
582 600Right-handed alpha
Helix 23
23
A
600 609Right-handed alpha
Helix 24
24
A
610 617Right-handed 310
Helix 25
25
A
618 633Right-handed alpha
Helix 26
26
A
635 645Right-handed alpha
Helix 27
27
A
648 660Right-handed alpha
Helix 28
28
A
664 677Right-handed alpha
Helix 29
29
A
681 693Right-handed alpha
Helix 30
30
A
695 705Right-handed alpha
Helix 31
31
A
705 718Right-handed alpha
Helix 32
32
A
721 735Right-handed alpha
Helix 33
33
A
740 747Right-handed alpha
Helix 34
34
A
753 776Right-handed alpha
Helix 35
35
B
104 108Right-handed 310
Helix 36
36
B
159 163Right-handed 310
Helix 37
37
B
193 211Right-handed alpha
Helix 38
38
B
242 246Right-handed alpha
Helix 39
39
B
252 269Right-handed alpha
Helix 40
40
B
280 282Right-handed 310
Helix 41
41
B
283 303Right-handed alpha
Helix 42
42
B
307 316Right-handed alpha
Helix 43
43
B
316 324Right-handed alpha
Helix 44
44
B
346 366Right-handed alpha
Helix 45
45
B
366 381Right-handed alpha
Helix 46
46
B
387 400Right-handed alpha
Helix 47
47
B
402 413Right-handed alpha
Helix 48
48
B
478 481Right-handed 310
Helix 49
49
B
489 497Right-handed alpha
Helix 50
50
B
498 503Right-handed 310
Helix 51
51
B
504 522Right-handed alpha
Helix 52
52
B
525 534Right-handed alpha
Helix 53
53
B
535 537Right-handed 310
Helix 54
54
B
541 557Right-handed alpha
Helix 55
55
B
562 578Right-handed alpha
Helix 56
56
B
582 600Right-handed alpha
Helix 57
57
B
600 609Right-handed alpha
Helix 58
58
B
610 614Right-handed 310
Helix 59
59
B
618 633Right-handed alpha
Helix 60
60
B
635 644Right-handed alpha
Helix 61
61
B
648 660Right-handed alpha
Helix 62
62
B
664 677Right-handed alpha
Helix 63
63
B
684 693Right-handed alpha
Helix 64
64
B
695 705Right-handed alpha
Helix 65
65
B
705 718Right-handed alpha
Helix 66
66
B
721 735Right-handed alpha
Helix 67
67
B
739 748Right-handed alpha
Helix 68
68
B
753 775Right-handed alpha
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There are 17 sheets in PDB entry 1Z5H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
40 46anti-parallel
Strand 3
A
69 78anti-parallel
Strand 4
A
18 27anti-parallel
Strand 5
A
3 13anti-parallel
Strand 6
A
120 127parallel
Strand 7
A
148 152anti-parallel
Strand 8
A
139 144anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 35first strand
Strand 2
A
59 62anti-parallel
Strand 3
A
54 55anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 89first strand
Strand 2
A
95 99anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 135first strand
Strand 2
A
165 168anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 177first strand
Strand 2
A
180 186anti-parallel
Strand 3
A
218 224parallel
Strand 4
A
237 241parallel
Strand 5
A
231 232anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 278first strand
Strand 2
A
384 386parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
441 442first strand
Strand 2
A
427 434anti-parallel
Strand 3
A
466 469anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
441 442first strand
Strand 2
A
427 434anti-parallel
Strand 3
A
417 423anti-parallel
Strand 4
A
485 487parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 462first strand
Strand 2
A
447 453anti-parallel
Strand 3
A
473 476anti-parallel
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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 50first strand
Strand 2
B
40 46anti-parallel
Strand 3
B
69 78anti-parallel
Strand 4
B
18 27anti-parallel
Strand 5
B
3 13anti-parallel
Strand 6
B
120 127parallel
Strand 7
B
148 152anti-parallel
Strand 8
B
139 144anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 35first strand
Strand 2
B
59 62anti-parallel
Strand 3
B
54 55anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 89first strand
Strand 2
B
95 99anti-parallel
Strand 3
B
165 168anti-parallel
Strand 4
B
132 135anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 177first strand
Strand 2
B
180 186anti-parallel
Strand 3
B
218 224parallel
Strand 4
B
237 241parallel
Strand 5
B
231 232anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
276 278first strand
Strand 2
B
384 386parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
439 442first strand
Strand 2
B
427 436anti-parallel
Strand 3
B
466 469anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
439 442first strand
Strand 2
B
427 436anti-parallel
Strand 3
B
417 420anti-parallel
Strand 4
B
485 487parallel
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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
457 462first strand
Strand 2
B
447 453anti-parallel
Strand 3
B
473 476anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il