Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z6Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z6Z entry

There are 6 chains in PDB entry 1Z6Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU -5LYS 258
B
LEU -5LYS 258
C
LEU -5LYS 258
D
LEU -5LYS 258
E
TYR -4LYS 258
F
LEU -5LYS 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 1Z6Z. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
14 26Right-handed alpha
Helix 2
2
A
40 50Right-handed alpha
Helix 3
3
A
52 57Right-handed alpha
Helix 4
4
A
69 82Right-handed alpha
Helix 5
5
A
107 111Right-handed 310
Helix 6
6
A
113 125Right-handed alpha
Helix 7
7
A
125 139Right-handed alpha
Helix 8
8
A
154 158Right-handed 310
Helix 9
9
A
164 185Right-handed alpha
Helix 10
10
A
200 210Right-handed alpha
Helix 11
11
A
212 225Right-handed alpha
Helix 12
12
A
230 245Right-handed alpha
Helix 13
13
B
14 26Right-handed alpha
Helix 14
14
B
40 50Right-handed alpha
Helix 15
15
B
69 82Right-handed alpha
Helix 16
16
B
107 111Right-handed 310
Helix 17
17
B
113 125Right-handed alpha
Helix 18
18
B
125 139Right-handed alpha
Helix 19
19
B
154 158Right-handed 310
Helix 20
20
B
164 185Right-handed alpha
Helix 21
21
B
200 210Right-handed alpha
Helix 22
22
B
212 226Right-handed alpha
Helix 23
23
B
230 245Right-handed alpha
Helix 24
24
C
14 26Right-handed alpha
Helix 25
25
C
40 50Right-handed alpha
Helix 26
26
C
53 56Right-handed 310
Helix 27
27
C
69 82Right-handed alpha
Helix 28
28
C
107 111Right-handed 310
Helix 29
29
C
113 125Right-handed alpha
Helix 30
30
C
125 139Right-handed alpha
Helix 31
31
C
154 158Right-handed 310
Helix 32
32
C
164 185Right-handed alpha
Helix 33
33
C
200 210Right-handed alpha
Helix 34
34
C
212 225Right-handed alpha
Helix 35
35
C
230 245Right-handed alpha
Helix 36
36
D
14 26Right-handed alpha
Helix 37
37
D
40 50Right-handed alpha
Helix 38
38
D
69 82Right-handed alpha
Helix 39
39
D
107 111Right-handed 310
Helix 40
40
D
113 125Right-handed alpha
Helix 41
41
D
125 139Right-handed alpha
Helix 42
42
D
154 158Right-handed 310
Helix 43
43
D
164 185Right-handed alpha
Helix 44
44
D
200 210Right-handed alpha
Helix 45
45
D
212 226Right-handed alpha
Helix 46
46
D
230 245Right-handed alpha
Helix 47
47
E
14 26Right-handed alpha
Helix 48
48
E
40 50Right-handed alpha
Helix 49
49
E
69 81Right-handed alpha
Helix 50
50
E
107 111Right-handed 310
Helix 51
51
E
113 125Right-handed alpha
Helix 52
52
E
125 139Right-handed alpha
Helix 53
53
E
154 158Right-handed 310
Helix 54
54
E
164 185Right-handed alpha
Helix 55
55
E
200 210Right-handed alpha
Helix 56
56
E
212 226Right-handed alpha
Helix 57
57
E
230 245Right-handed alpha
Helix 58
58
F
14 26Right-handed alpha
Helix 59
59
F
40 50Right-handed alpha
Helix 60
60
F
69 82Right-handed alpha
Helix 61
61
F
107 111Right-handed 310
Helix 62
62
F
113 125Right-handed alpha
Helix 63
63
F
125 139Right-handed alpha
Helix 64
64
F
154 158Right-handed 310
Helix 65
65
F
164 185Right-handed alpha
Helix 66
66
F
200 210Right-handed alpha
Helix 67
67
F
212 226Right-handed alpha
Helix 68
68
F
230 245Right-handed alpha
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There are 6 sheets in PDB entry 1Z6Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
59 64first strand
Strand 2
A
33 38parallel
Strand 3
A
5 10parallel
Strand 4
A
91 96parallel
Strand 5
A
146 152parallel
Strand 6
A
188 194parallel
Strand 7
A
252 254parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
59 64first strand
Strand 2
B
33 38parallel
Strand 3
B
5 10parallel
Strand 4
B
91 96parallel
Strand 5
B
146 152parallel
Strand 6
B
188 194parallel
Strand 7
B
252 254parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
58 64first strand
Strand 2
C
32 38parallel
Strand 3
C
5 9parallel
Strand 4
C
91 96parallel
Strand 5
C
146 152parallel
Strand 6
C
188 194parallel
Strand 7
C
252 254parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
59 64first strand
Strand 2
D
33 38parallel
Strand 3
D
5 9parallel
Strand 4
D
91 96parallel
Strand 5
D
146 152parallel
Strand 6
D
188 194parallel
Strand 7
D
252 254parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
59 64first strand
Strand 2
E
33 38parallel
Strand 3
E
5 10parallel
Strand 4
E
91 96parallel
Strand 5
E
146 152parallel
Strand 6
E
188 194parallel
Strand 7
E
252 254parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
59 64first strand
Strand 2
F
33 38parallel
Strand 3
F
5 9parallel
Strand 4
F
91 96parallel
Strand 5
F
146 152parallel
Strand 6
F
188 194parallel
Strand 7
F
252 254parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il