Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZD5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZD5 entry

There is 1 chain in PDB entry 1ZD5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ASN 547
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 1ZD5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 31Right-handed alpha
Helix 2
2
A
35 42Right-handed alpha
Helix 3
3
A
44 47Right-handed 310
Helix 4
4
A
48 56Right-handed alpha
Helix 5
5
A
59 74Right-handed alpha
Helix 6
6
A
87 99Right-handed alpha
Helix 7
7
A
102 115Right-handed alpha
Helix 8
8
A
133 145Right-handed alpha
Helix 9
9
A
153 157Right-handed alpha
Helix 10
10
A
162 174Right-handed alpha
Helix 11
11
A
176 178Right-handed 310
Helix 12
12
A
186 189Right-handed 310
Helix 13
13
A
190 196Right-handed alpha
Helix 14
14
A
205 218Right-handed alpha
Helix 15
15
A
231 235Right-handed 310
Helix 16
16
A
268 273Right-handed 310
Helix 17
17
A
274 282Right-handed alpha
Helix 18
18
A
303 306Right-handed 310
Helix 19
19
A
307 323Right-handed alpha
Helix 20
20
A
333 346Right-handed alpha
Helix 21
21
A
368 375Right-handed alpha
Helix 22
22
A
376 379Right-handed 310
Helix 23
23
A
380 385Right-handed alpha
Helix 24
24
A
389 398Right-handed alpha
Helix 25
25
A
398 407Right-handed alpha
Helix 26
26
A
409 413Right-handed 310
Helix 27
27
A
442 457Right-handed alpha
Helix 28
28
A
458 464Right-handed alpha
Helix 29
29
A
467 477Right-handed alpha
Helix 30
30
A
499 504Right-handed 310
Helix 31
31
A
505 509Right-handed 310
Helix 32
32
A
524 529Right-handed alpha
Helix 33
33
A
529 545Right-handed alpha
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There are 3 sheets in PDB entry 1ZD5. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 152first strand
Strand 2
A
118 123parallel
Strand 3
A
5 8parallel
Strand 4
A
180 184parallel
Strand 5
A
199 202parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
100 101anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 243first strand
Strand 2
A
246 253anti-parallel
Strand 3
A
285 290anti-parallel
Strand 4
A
258 262parallel
Strand 5
A
327 332parallel
Strand 6
A
350 356parallel
Strand 7
A
487 492parallel
Strand 8
A
514 518parallel
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