Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZOI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZOI entry

There are 3 chains in PDB entry 1ZOI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2SER 276
B
 SER 2ARG 275
C
 SER 2SER 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 1ZOI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 37Right-handed 310
Helix 2
2
A
38 48Right-handed alpha
Helix 3
3
A
71 87Right-handed alpha
Helix 4
4
A
98 110Right-handed alpha
Helix 5
5
A
139 153Right-handed alpha
Helix 6
6
A
153 164Right-handed alpha
Helix 7
7
A
177 191Right-handed alpha
Helix 8
8
A
192 205Right-handed alpha
Helix 9
9
A
208 215Right-handed alpha
Helix 10
10
A
235 243Right-handed alpha
Helix 11
11
A
257 262Right-handed alpha
Helix 12
12
A
262 275Right-handed alpha
Helix 13
13
B
34 37Right-handed 310
Helix 14
14
B
38 47Right-handed alpha
Helix 15
15
B
71 87Right-handed alpha
Helix 16
16
B
98 110Right-handed alpha
Helix 17
17
B
139 153Right-handed alpha
Helix 18
18
B
153 164Right-handed alpha
Helix 19
19
B
177 191Right-handed alpha
Helix 20
20
B
192 205Right-handed alpha
Helix 21
21
B
208 215Right-handed alpha
Helix 22
22
B
235 243Right-handed alpha
Helix 23
23
B
257 262Right-handed alpha
Helix 24
24
B
262 275Right-handed alpha
Helix 25
25
C
34 37Right-handed 310
Helix 26
26
C
38 47Right-handed alpha
Helix 27
27
C
71 87Right-handed alpha
Helix 28
28
C
98 110Right-handed alpha
Helix 29
29
C
139 153Right-handed alpha
Helix 30
30
C
153 164Right-handed alpha
Helix 31
31
C
177 190Right-handed alpha
Helix 32
32
C
192 205Right-handed alpha
Helix 33
33
C
208 215Right-handed alpha
Helix 34
34
C
235 243Right-handed alpha
Helix 35
35
C
257 262Right-handed alpha
Helix 36
36
C
262 275Right-handed alpha
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There are 3 sheets in PDB entry 1ZOI. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
11 17anti-parallel
Strand 3
A
51 55anti-parallel
Strand 4
A
24 28parallel
Strand 5
A
92 96parallel
Strand 6
A
118 121parallel
Strand 7
A
219 224parallel
Strand 8
A
246 251parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 5first strand
Strand 2
B
11 17anti-parallel
Strand 3
B
51 55anti-parallel
Strand 4
B
24 28parallel
Strand 5
B
92 96parallel
Strand 6
B
118 121parallel
Strand 7
B
219 224parallel
Strand 8
B
246 251parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 5first strand
Strand 2
C
11 17anti-parallel
Strand 3
C
51 55anti-parallel
Strand 4
C
24 28parallel
Strand 5
C
92 96parallel
Strand 6
C
118 121parallel
Strand 7
C
219 224parallel
Strand 8
C
246 251parallel
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