Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZVR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZVR entry

There is 1 chain in PDB entry 1ZVR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 73ARG 586
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 1ZVR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
166 170Right-handed 310
Helix 2
2
A
171 184Right-handed alpha
Helix 3
3
A
185 189Right-handed 310
Helix 4
4
A
192 196Right-handed 310
Helix 5
5
A
204 208Right-handed 310
Helix 6
6
A
210 218Right-handed alpha
Helix 7
7
A
251 262Right-handed alpha
Helix 8
8
A
263 266Right-handed 310
Helix 9
9
A
296 308Right-handed alpha
Helix 10
10
A
323 334Right-handed alpha
Helix 11
11
A
355 371Right-handed alpha
Helix 12
12
A
375 377Right-handed 310
Helix 13
13
A
378 387Right-handed alpha
Helix 14
14
A
387 408Right-handed alpha
Helix 15
15
A
422 436Right-handed alpha
Helix 16
16
A
437 440Right-handed 310
Helix 17
17
A
441 453Right-handed alpha
Helix 18
18
A
459 465Right-handed alpha
Helix 19
19
A
478 494Right-handed alpha
Helix 20
20
A
501 515Right-handed alpha
Helix 21
21
A
524 532Right-handed alpha
Helix 22
22
A
532 537Right-handed alpha
Helix 23
23
A
539 546Right-handed alpha
Helix 24
24
A
547 552Right-handed 310
Helix 25
25
A
576 581Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 1ZVR. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 128first strand
Strand 2
A
111 116anti-parallel
Strand 3
A
99 108anti-parallel
Strand 4
A
84 95anti-parallel
Strand 5
A
160 164anti-parallel
Strand 6
A
150 155anti-parallel
Strand 7
A
132 138anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 228first strand
Strand 2
A
244 247anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 273first strand
Strand 2
A
280 284anti-parallel
Strand 3
A
412 416parallel
Strand 4
A
316 320parallel
Strand 5
A
346 350parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il