Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZXM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZXM entry

There are 2 chains in PDB entry 1ZXM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 29CYS 405
B
 SER 29ILE 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1ZXM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 34Right-handed alpha
Helix 2
2
A
38 46Right-handed alpha
Helix 3
3
A
47 52Right-handed alpha
Helix 4
4
A
78 99Right-handed alpha
Helix 5
5
A
137 144Right-handed alpha
Helix 6
6
A
152 156Right-handed 310
Helix 7
7
A
165 173Right-handed alpha
Helix 8
8
A
223 227Right-handed 310
Helix 9
9
A
232 250Right-handed alpha
Helix 10
10
A
266 276Right-handed alpha
Helix 11
11
A
324 342Right-handed alpha
Helix 12
12
A
352 358Right-handed alpha
Helix 13
13
A
384 388Right-handed 310
Helix 14
14
A
395 403Right-handed alpha
Helix 15
15
B
29 34Right-handed alpha
Helix 16
16
B
38 46Right-handed alpha
Helix 17
17
B
47 52Right-handed alpha
Helix 18
18
B
78 99Right-handed alpha
Helix 19
19
B
137 144Right-handed alpha
Helix 20
20
B
165 173Right-handed alpha
Helix 21
21
B
223 227Right-handed 310
Helix 22
22
B
232 250Right-handed alpha
Helix 23
23
B
266 276Right-handed alpha
Helix 24
24
B
324 343Right-handed alpha
Helix 25
25
B
352 358Right-handed alpha
Helix 26
26
B
384 388Right-handed 310
Helix 27
27
B
395 403Right-handed alpha
Helix 28
28
B
406 411Right-handed alpha
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There are 14 sheets in PDB entry 1ZXM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 36first strand
Strand 2
B
147 148anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 65first strand
Strand 2
A
69 77anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
188 195anti-parallel
Strand 3
A
205 208anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
188 195anti-parallel
Strand 3
A
174 183anti-parallel
Strand 4
A
214 221anti-parallel
Strand 5
A
115 121anti-parallel
Strand 6
A
104 110anti-parallel
Strand 7
A
254 257parallel
Strand 8
A
260 261anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
A
135 136anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
B
35 36anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 294first strand
Strand 2
A
297 303anti-parallel
Strand 3
A
360 366anti-parallel
Strand 4
A
309 314parallel
Strand 5
A
317 318anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 323first strand
Strand 2
A
380 381parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 65first strand
Strand 2
B
69 77anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 201first strand
Strand 2
B
188 195anti-parallel
Strand 3
B
205 208anti-parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 201first strand
Strand 2
B
188 195anti-parallel
Strand 3
B
174 183anti-parallel
Strand 4
B
214 221anti-parallel
Strand 5
B
115 121anti-parallel
Strand 6
B
104 110anti-parallel
Strand 7
B
254 257parallel
Strand 8
B
260 261anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 130first strand
Strand 2
B
135 136anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
289 294first strand
Strand 2
B
297 303anti-parallel
Strand 3
B
360 366anti-parallel
Strand 4
B
309 314parallel
Strand 5
B
317 318anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
322 323first strand
Strand 2
B
380 381parallel
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