Analysis of interatomic Contacts of Structural Units in PDB entry:
2BN7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BN7 entry

There is 1 chain in PDB entry 2BN7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1GLN 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2BN7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 19Right-handed alpha
Helix 2
2
A
46 54Right-handed alpha
Helix 3
3
A
82 90Right-handed alpha
Helix 4
4
A
97 103Right-handed alpha
Helix 5
5
A
112 122Right-handed alpha
Helix 6
6
A
134 151Right-handed alpha
Helix 7
7
A
152 155Right-handed 310
Helix 8
8
A
165 174Right-handed alpha
Helix 9
9
A
177 202Right-handed alpha
Helix 10
10
A
207 222Right-handed alpha
Helix 11
11
A
237 241Right-handed 310
Helix 12
12
A
283 304Right-handed alpha
Helix 13
13
A
309 328Right-handed alpha
Helix 14
14
A
334 341Right-handed alpha
Helix 15
15
A
367 371Right-handed 310
Helix 16
16
A
395 399Right-handed 310
Helix 17
17
A
426 439Right-handed alpha
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There are 6 sheets in PDB entry 2BN7. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 109first strand
Strand 2
A
71 78parallel
Strand 3
A
61 68anti-parallel
Strand 4
A
23 28anti-parallel
Strand 5
A
126 129parallel
Strand 6
A
161 163parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 36first strand
Strand 2
A
39 40anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
263 265anti-parallel
Strand 3
A
268 269anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 235first strand
Strand 2
A
256 261anti-parallel
Strand 3
A
272 277anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 382first strand
Strand 2
A
407 411anti-parallel
Strand 3
A
416 418anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 388first strand
Strand 2
A
401 404anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il