Analysis of interatomic Contacts of Structural Units in PDB entry:
2BOA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BOA entry

There are 2 chains in PDB entry 2BOA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 4TYR 1309
B
ARG 4TYR 1309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 2BOA. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
19 30Right-handed alpha
Helix 2
2
A
31 35Right-handed 310
Helix 3
3
A
57 59Right-handed 310
Helix 4
4
A
60 71Right-handed alpha
Helix 5
5
A
81 1005Right-handed alpha
Helix 6
6
A
1014 1029Right-handed alpha
Helix 7
7
A
1072 1089Right-handed alpha
Helix 8
8
A
1093 1103Right-handed alpha
Helix 9
9
A
1112 1122Right-handed alpha
Helix 10
10
A
1142 1146Right-handed 310
Helix 11
11
A
1173 1187Right-handed alpha
Helix 12
12
A
1215 1235Right-handed alpha
Helix 13
13
A
1243 1247Right-handed alpha
Helix 14
14
A
1253 1261Right-handed alpha
Helix 15
15
A
1282 1284Right-handed 310
Helix 16
16
A
1285 1307Right-handed alpha
Helix 17
17
B
19 30Right-handed alpha
Helix 18
18
B
57 59Right-handed 310
Helix 19
19
B
60 72Right-handed alpha
Helix 20
20
B
81 1005Right-handed alpha
Helix 21
21
B
1014 1029Right-handed alpha
Helix 22
22
B
1072 1090Right-handed alpha
Helix 23
23
B
1093 1103Right-handed alpha
Helix 24
24
B
1112 1122Right-handed alpha
Helix 25
25
B
1142 1146Right-handed 310
Helix 26
26
B
1173 1187Right-handed alpha
Helix 27
27
B
1215 1232Right-handed alpha
Helix 28
28
B
1243 1247Right-handed alpha
Helix 29
29
B
1253 1261Right-handed alpha
Helix 30
30
B
1282 1284Right-handed 310
Helix 31
31
B
1285 1307Right-handed alpha
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There are 4 sheets in PDB entry 2BOA. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
36 39first strand
Strand 2
A
52 56anti-parallel
Strand 3
A
11 15anti-parallel
Strand 4
A
75 79anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1033 1040first strand
Strand 2
A
1046 1052anti-parallel
Strand 3
A
1104 1108anti-parallel
Strand 4
A
1061 1066parallel
Strand 5
A
1189 1196parallel
Strand 6
A
1265 1270parallel
Strand 7
A
1201 1204anti-parallel
Strand 8
A
1239 1242parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
36 39first strand
Strand 2
B
51 56anti-parallel
Strand 3
B
11 16anti-parallel
Strand 4
B
75 79anti-parallel
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There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1033 1040first strand
Strand 2
B
1046 1052anti-parallel
Strand 3
B
1104 1108anti-parallel
Strand 4
B
1061 1066parallel
Strand 5
B
1189 1196parallel
Strand 6
B
1265 1270parallel
Strand 7
B
1201 1204anti-parallel
Strand 8
B
1239 1242parallel
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