Analysis of interatomic Contacts of Structural Units in PDB entry:
2BP7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BP7 entry

There are 8 chains in PDB entry 2BP7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2LEU 408
B
 ALA 2VAL 339
C
 ASN 2LEU 408
D
 ALA 2VAL 339
E
 ASN 2LEU 408
F
 ALA 2VAL 339
G
 ASN 2LEU 408
H
 ALA 2VAL 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are147 helices in PDB entry 2BP7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 27Right-handed 310
Helix 2
2
A
43 48Right-handed 310
Helix 3
3
A
49 53Right-handed 310
Helix 4
4
A
66 70Right-handed 310
Helix 5
5
A
73 100Right-handed alpha
Helix 6
6
A
112 123Right-handed alpha
Helix 7
7
A
135 142Right-handed alpha
Helix 8
8
A
145 155Right-handed alpha
Helix 9
9
A
173 176Right-handed 310
Helix 10
10
A
185 201Right-handed alpha
Helix 11
11
A
214 217Right-handed 310
Helix 12
12
A
218 232Right-handed alpha
Helix 13
13
A
251 254Right-handed 310
Helix 14
14
A
261 267Right-handed alpha
Helix 15
15
A
278 295Right-handed alpha
Helix 16
16
A
317 321Right-handed 310
Helix 17
17
A
325 330Right-handed alpha
Helix 18
18
A
334 346Right-handed alpha
Helix 19
19
A
350 374Right-handed alpha
Helix 20
20
A
398 407Right-handed alpha
Helix 21
21
B
7 23Right-handed alpha
Helix 22
22
B
45 51Right-handed alpha
Helix 23
23
B
61 76Right-handed alpha
Helix 24
24
B
85 89Right-handed 310
Helix 25
25
B
89 91Right-handed 310
Helix 26
26
B
92 99Right-handed alpha
Helix 27
27
B
102 107Right-handed alpha
Helix 28
28
B
136 141Right-handed alpha
Helix 29
29
B
152 166Right-handed alpha
Helix 30
30
B
177 179Right-handed 310
Helix 31
31
B
193 197Right-handed 310
Helix 32
32
B
230 243Right-handed alpha
Helix 33
33
B
258 270Right-handed alpha
Helix 34
34
B
283 296Right-handed alpha
Helix 35
35
B
318 323Right-handed alpha
Helix 36
36
B
325 337Right-handed alpha
Helix 37
37
C
23 27Right-handed 310
Helix 38
38
C
43 46Right-handed 310
Helix 39
39
C
47 52Right-handed alpha
Helix 40
40
C
66 70Right-handed 310
Helix 41
41
C
73 100Right-handed alpha
Helix 42
42
C
112 123Right-handed alpha
Helix 43
43
C
135 142Right-handed alpha
Helix 44
44
C
145 155Right-handed alpha
Helix 45
45
C
173 176Right-handed 310
Helix 46
46
C
185 201Right-handed alpha
Helix 47
47
C
214 217Right-handed 310
Helix 48
48
C
218 231Right-handed alpha
Helix 49
49
A
2 256Right-handed alpha
Helix 50
50
C
261 267Right-handed alpha
Helix 51
51
C
278 295Right-handed alpha
Helix 52
52
C
317 321Right-handed 310
Helix 53
53
C
326 330Right-handed 310
Helix 54
54
C
334 346Right-handed alpha
Helix 55
55
C
350 374Right-handed alpha
Helix 56
56
C
386 391Right-handed 310
Helix 57
57
C
398 407Right-handed alpha
Helix 58
58
D
7 23Right-handed alpha
Helix 59
59
D
45 51Right-handed alpha
Helix 60
60
D
61 76Right-handed alpha
Helix 61
61
D
85 89Right-handed 310
Helix 62
62
D
89 91Right-handed 310
Helix 63
63
D
92 98Right-handed alpha
Helix 64
64
D
102 108Right-handed alpha
Helix 65
65
D
136 141Right-handed alpha
Helix 66
66
D
152 166Right-handed alpha
Helix 67
67
D
177 179Right-handed 310
Helix 68
68
D
193 197Right-handed 310
Helix 69
69
D
230 243Right-handed alpha
Helix 70
70
D
258 270Right-handed alpha
Helix 71
71
D
283 296Right-handed alpha
Helix 72
72
D
318 323Right-handed alpha
Helix 73
73
D
325 337Right-handed alpha
Helix 74
74
E
23 27Right-handed 310
Helix 75
75
E
43 48Right-handed 310
Helix 76
76
E
49 53Right-handed 310
Helix 77
77
E
66 70Right-handed 310
Helix 78
78
E
73 100Right-handed alpha
Helix 79
79
E
112 123Right-handed alpha
Helix 80
80
E
135 142Right-handed alpha
Helix 81
81
E
145 155Right-handed alpha
Helix 82
82
E
173 176Right-handed 310
Helix 83
83
E
185 201Right-handed alpha
Helix 84
84
E
214 217Right-handed 310
Helix 85
85
E
218 231Right-handed alpha
Helix 86
86
A
2 256Right-handed alpha
Helix 87
87
E
260 267Right-handed alpha
Helix 88
88
E
278 295Right-handed alpha
Helix 89
89
E
317 321Right-handed 310
Helix 90
90
E
325 330Right-handed alpha
Helix 91
91
E
334 346Right-handed alpha
Helix 92
92
E
350 374Right-handed alpha
Helix 93
93
E
386 391Right-handed 310
Helix 94
94
E
398 407Right-handed alpha
Helix 95
95
F
7 23Right-handed alpha
Helix 96
96
F
45 51Right-handed alpha
Helix 97
97
F
61 76Right-handed alpha
Helix 98
98
F
85 89Right-handed 310
Helix 99
99
F
89 91Right-handed 310
Helix 100
100
F
92 98Right-handed alpha
Helix 101
101
F
102 107Right-handed alpha
Helix 102
102
F
136 141Right-handed alpha
Helix 103
103
F
152 166Right-handed alpha
Helix 104
104
F
177 179Right-handed 310
Helix 105
105
F
193 197Right-handed 310
Helix 106
106
F
230 243Right-handed alpha
Helix 107
107
F
258 270Right-handed alpha
Helix 108
108
F
283 296Right-handed alpha
Helix 109
109
F
318 323Right-handed alpha
Helix 110
110
F
325 337Right-handed alpha
Helix 111
111
G
23 27Right-handed 310
Helix 112
112
G
43 46Right-handed 310
Helix 113
113
G
47 52Right-handed alpha
Helix 114
114
G
66 70Right-handed 310
Helix 115
115
G
73 100Right-handed alpha
Helix 116
116
G
112 123Right-handed alpha
Helix 117
117
G
135 142Right-handed alpha
Helix 118
118
G
145 155Right-handed alpha
Helix 119
119
G
173 176Right-handed 310
Helix 120
120
G
185 201Right-handed alpha
Helix 121
121
G
214 217Right-handed 310
Helix 122
122
G
218 231Right-handed alpha
Helix 123
123
A
2 256Right-handed alpha
Helix 124
124
G
259 267Right-handed alpha
Helix 125
125
G
278 295Right-handed alpha
Helix 126
126
G
317 321Right-handed 310
Helix 127
127
G
325 330Right-handed alpha
Helix 128
128
G
334 346Right-handed alpha
Helix 129
129
G
350 374Right-handed alpha
Helix 130
130
G
386 391Right-handed 310
Helix 131
131
G
398 407Right-handed alpha
Helix 132
132
H
7 23Right-handed alpha
Helix 133
133
H
45 51Right-handed alpha
Helix 134
134
H
61 76Right-handed alpha
Helix 135
135
H
85 89Right-handed 310
Helix 136
136
H
89 91Right-handed 310
Helix 137
137
H
92 98Right-handed alpha
Helix 138
138
H
102 107Right-handed alpha
Helix 139
139
H
136 141Right-handed alpha
Helix 140
140
H
152 166Right-handed alpha
Helix 141
141
H
177 179Right-handed 310
Helix 142
142
H
193 197Right-handed 310
Helix 143
143
H
230 243Right-handed alpha
Helix 144
144
H
258 270Right-handed alpha
Helix 145
145
H
283 296Right-handed alpha
Helix 146
146
H
318 323Right-handed alpha
Helix 147
147
H
325 337Right-handed alpha
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There are 20 sheets in PDB entry 2BP7. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, BC, CA, CB, A, DB, C, EA, EB, FA, FB, FC, GA, GB, HA, HB, HC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
A
207 212parallel
Strand 3
A
235 241parallel
Strand 4
A
300 305parallel
Strand 5
A
270 275parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 245first strand
Strand 2
A
248 249anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 5first strand
Strand 2
B
201 203anti-parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 57first strand
Strand 2
B
26 30parallel
Strand 3
B
78 82parallel
Strand 4
B
116 121parallel
Strand 5
B
170 175parallel
Strand 6
B
146 148parallel
Strand 7
B
253 255anti-parallel
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There are 5 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 218first strand
Strand 2
B
247 250anti-parallel
Strand 3
B
224 227parallel
Strand 4
B
272 279parallel
Strand 5
B
305 309parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
129 130first strand
Strand 2
C
207 212parallel
Strand 3
C
235 241parallel
Strand 4
C
300 305parallel
Strand 5
C
270 275parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
244 245first strand
Strand 2
C
248 249anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 5first strand
Strand 2
D
201 203anti-parallel
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There are 7 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
55 57first strand
Strand 2
D
26 30parallel
Strand 3
D
78 82parallel
Strand 4
D
116 121parallel
Strand 5
D
170 175parallel
Strand 6
D
146 148parallel
Strand 7
D
253 255anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
215 218first strand
Strand 2
D
247 250anti-parallel
Strand 3
D
224 227parallel
Strand 4
D
272 279parallel
Strand 5
D
305 309parallel
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There are 5 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
128 130first strand
Strand 2
E
207 212parallel
Strand 3
E
235 241parallel
Strand 4
E
300 305parallel
Strand 5
E
270 275parallel
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There are 2 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
244 245first strand
Strand 2
E
248 249anti-parallel
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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3 5first strand
Strand 2
F
201 203anti-parallel
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There are 7 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
55 57first strand
Strand 2
F
26 30parallel
Strand 3
F
78 82parallel
Strand 4
F
116 121parallel
Strand 5
F
170 175parallel
Strand 6
F
146 148parallel
Strand 7
F
253 255anti-parallel
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There are 5 strands in FC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
215 218first strand
Strand 2
F
247 250anti-parallel
Strand 3
F
224 227parallel
Strand 4
F
272 279parallel
Strand 5
F
305 309parallel
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There are 5 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
128 130first strand
Strand 2
G
207 212parallel
Strand 3
G
235 241parallel
Strand 4
G
300 305parallel
Strand 5
G
270 275parallel
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There are 2 strands in GB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
244 245first strand
Strand 2
G
248 249anti-parallel
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There are 2 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 5first strand
Strand 2
H
201 203anti-parallel
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There are 7 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
55 57first strand
Strand 2
H
26 30parallel
Strand 3
H
78 82parallel
Strand 4
H
116 121parallel
Strand 5
H
170 175parallel
Strand 6
H
146 148parallel
Strand 7
H
253 255anti-parallel
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There are 5 strands in HC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
215 218first strand
Strand 2
H
247 250anti-parallel
Strand 3
H
224 227parallel
Strand 4
H
272 279parallel
Strand 5
H
305 309parallel
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