Analysis of interatomic Contacts of Structural Units in PDB entry:
2BSQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BSQ entry

There are 12 chains in PDB entry 2BSQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 144
B
 MET 1HIS 141
C
 MET 1HIS 144
D
 MET 1HIS 141
E
 ALA 2ARG 70
F
 ALA 2ASP 66
G
 ALA 2GLY 69
H
 ALA 2GLU 65
I
 A 1 T 33
I
 T 35 G 36
J
 C 37 A 51
J
 A 53 T 72
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 2BSQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 11Right-handed alpha
Helix 2
2
A
12 14Right-handed 310
Helix 3
3
A
18 27Right-handed alpha
Helix 4
4
A
29 31Right-handed 310
Helix 5
5
A
37 49Right-handed alpha
Helix 6
6
A
53 66Right-handed alpha
Helix 7
7
A
67 72Right-handed 310
Helix 8
8
A
79 95Right-handed alpha
Helix 9
9
A
101 114Right-handed alpha
Helix 10
10
A
122 127Right-handed alpha
Helix 11
11
A
128 130Right-handed 310
Helix 12
12
B
5 10Right-handed alpha
Helix 13
13
B
18 26Right-handed alpha
Helix 14
14
B
29 31Right-handed 310
Helix 15
15
B
37 49Right-handed alpha
Helix 16
16
B
53 66Right-handed alpha
Helix 17
17
B
67 72Right-handed 310
Helix 18
18
B
79 95Right-handed alpha
Helix 19
19
B
101 114Right-handed alpha
Helix 20
20
B
122 129Right-handed alpha
Helix 21
21
C
5 11Right-handed alpha
Helix 22
22
C
12 14Right-handed 310
Helix 23
23
C
18 27Right-handed alpha
Helix 24
24
C
29 31Right-handed 310
Helix 25
25
C
37 49Right-handed alpha
Helix 26
26
C
53 66Right-handed alpha
Helix 27
27
C
67 72Right-handed 310
Helix 28
28
C
79 95Right-handed alpha
Helix 29
29
C
101 114Right-handed alpha
Helix 30
30
C
122 127Right-handed alpha
Helix 31
31
C
128 130Right-handed 310
Helix 32
32
D
5 11Right-handed alpha
Helix 33
33
D
12 14Right-handed 310
Helix 34
34
D
18 26Right-handed alpha
Helix 35
35
D
29 31Right-handed 310
Helix 36
36
D
37 49Right-handed alpha
Helix 37
37
D
53 66Right-handed alpha
Helix 38
38
D
67 71Right-handed 310
Helix 39
39
D
79 95Right-handed alpha
Helix 40
40
D
101 115Right-handed alpha
Helix 41
41
D
122 129Right-handed alpha
Helix 42
42
E
10 24Right-handed alpha
Helix 43
43
E
27 44Right-handed alpha
Helix 44
44
E
47 59Right-handed alpha
Helix 45
45
F
10 23Right-handed alpha
Helix 46
46
F
27 44Right-handed alpha
Helix 47
47
F
47 59Right-handed alpha
Helix 48
48
G
10 24Right-handed alpha
Helix 49
49
G
27 44Right-handed alpha
Helix 50
50
G
47 60Right-handed alpha
Helix 51
51
H
12 24Right-handed alpha
Helix 52
52
H
27 44Right-handed alpha
Helix 53
53
H
47 59Right-handed alpha
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There are 6 sheets in PDB entry 2BSQ. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
33 36parallel
Strand 3
A
2 4parallel
Strand 4
A
117 119parallel
Strand 5
A
133 134parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 76first strand
Strand 2
B
33 36parallel
Strand 3
B
2 4parallel
Strand 4
B
117 119parallel
Strand 5
B
133 134parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
75 76first strand
Strand 2
C
33 36parallel
Strand 3
C
2 4parallel
Strand 4
C
117 119parallel
Strand 5
C
133 134parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
75 76first strand
Strand 2
D
33 36parallel
Strand 3
D
2 4parallel
Strand 4
D
117 119parallel
Strand 5
D
133 134parallel
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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 6first strand
Strand 2
H
4 6anti-parallel
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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
4 6first strand
Strand 2
G
4 6anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il