Analysis of interatomic Contacts of Structural Units in PDB entry:
2CE4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2CE4 entry

There are 2 chains in PDB entry 2CE4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 1LYS 210
B
LEU -1LYS 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 2CE4. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
19 29Right-handed alpha
Helix 2
2
A
29 43Right-handed alpha
Helix 3
3
A
51 56Right-handed alpha
Helix 4
4
A
66 86Right-handed alpha
Helix 5
5
A
100 112Right-handed alpha
Helix 6
6
A
113 127Right-handed alpha
Helix 7
7
A
153 156Right-handed 310
Helix 8
8
A
157 162Right-handed alpha
Helix 9
9
A
174 177Right-handed 310
Helix 10
10
A
178 183Right-handed alpha
Helix 11
11
A
185 194Right-handed alpha
Helix 12
12
A
198 210Right-handed alpha
Helix 13
13
B
19 29Right-handed alpha
Helix 14
14
B
29 43Right-handed alpha
Helix 15
15
B
51 56Right-handed alpha
Helix 16
16
B
57 62Right-handed 310
Helix 17
17
B
63 86Right-handed alpha
Helix 18
18
B
100 112Right-handed alpha
Helix 19
19
B
113 127Right-handed alpha
Helix 20
20
B
153 156Right-handed 310
Helix 21
21
B
157 162Right-handed alpha
Helix 22
22
B
174 177Right-handed 310
Helix 23
23
B
178 183Right-handed alpha
Helix 24
24
B
185 194Right-handed alpha
Helix 25
25
B
198 210Right-handed alpha
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There are 2 sheets in PDB entry 2CE4. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
142 149first strand
Strand 2
A
132 139anti-parallel
Strand 3
A
166 172anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
142 149first strand
Strand 2
B
132 139anti-parallel
Strand 3
B
166 172anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il