Analysis of interatomic Contacts of Structural Units in PDB entry:
2D3E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2D3E entry

There are 4 chains in PDB entry 2D3E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 153THR 282
B
 ASP 153THR 282
C
 ASP 153THR 282
D
 ASP 153THR 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2D3E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
153 212Right-handed alpha
Helix 2
2
A
212 217Right-handed alpha
Helix 3
3
A
217 282Right-handed alpha
Helix 4
4
B
153 186Right-handed alpha
Helix 5
5
B
188 201Right-handed alpha
Helix 6
6
B
204 210Right-handed alpha
Helix 7
7
B
211 214Right-handed 310
Helix 8
8
B
215 281Right-handed alpha
Helix 9
9
C
153 212Right-handed alpha
Helix 10
10
C
212 217Right-handed alpha
Helix 11
11
C
217 282Right-handed alpha
Helix 12
12
D
153 186Right-handed alpha
Helix 13
13
D
188 201Right-handed alpha
Helix 14
14
D
204 210Right-handed alpha
Helix 15
15
D
211 214Right-handed 310
Helix 16
16
D
215 281Right-handed alpha
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There are no sheets in PDB entry 2D3E
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il