Analysis of interatomic Contacts of Structural Units in PDB entry:
2DHB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2DHB entry

There are 2 chains in PDB entry 2DHB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 1ARG 141
B
VAL 1HIS 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 2DHB. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA
A
3 18Right-handed alpha
Helix 2
AB
A
20 35Right-handed alpha
Helix 3
AC
A
36 42Right-handed alpha
Helix 4
AD
A
50 51Right-handed alpha
Helix 5
AE
A
52 71Right-handed alpha
Helix 6
AF
A
80 88Right-handed alpha
Helix 7
AG
A
94 112Right-handed alpha
Helix 8
AH
A
118 141Right-handed alpha
Helix 9
BA
B
4 18Right-handed alpha
Helix 10
BB
B
19 34Right-handed alpha
Helix 11
BC
B
35 41Right-handed alpha
Helix 12
BD
B
50 56Right-handed alpha
Helix 13
BE
B
57 76Right-handed alpha
Helix 14
BF
B
85 93Right-handed alpha
Helix 15
BG
B
99 117Right-handed alpha
Helix 16
BH
B
123 146Right-handed alpha
Back to top of page
There are no sheets in PDB entry 2DHB

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il