Analysis of interatomic Contacts of Structural Units in PDB entry:
2DVW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2DVW entry

There are 2 chains in PDB entry 2DVW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3MET 231
B
 MET 336LYS 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2DVW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 17Right-handed alpha
Helix 2
2
A
18 29Right-handed alpha
Helix 3
3
A
30 35Right-handed 310
Helix 4
4
A
42 51Right-handed alpha
Helix 5
5
A
52 63Right-handed alpha
Helix 6
6
A
75 83Right-handed alpha
Helix 7
7
A
85 95Right-handed alpha
Helix 8
8
A
108 116Right-handed alpha
Helix 9
9
A
118 128Right-handed alpha
Helix 10
10
A
141 150Right-handed alpha
Helix 11
11
A
151 161Right-handed alpha
Helix 12
12
A
174 182Right-handed alpha
Helix 13
13
A
184 194Right-handed alpha
Helix 14
14
A
207 212Right-handed alpha
Helix 15
15
A
213 230Right-handed alpha
Helix 16
16
B
337 349Right-handed alpha
Helix 17
17
B
360 365Right-handed alpha
Helix 18
18
B
371 389Right-handed alpha
Helix 19
19
B
395 407Right-handed alpha
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There are no sheets in PDB entry 2DVW
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il