Analysis of interatomic Contacts of Structural Units in PDB entry:
2E0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E0P entry

There is 1 chain in PDB entry 2E0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 7GLU 515
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2E0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 49Right-handed 310
Helix 2
2
A
61 64Right-handed 310
Helix 3
3
A
70 76Right-handed alpha
Helix 4
4
A
79 83Right-handed 310
Helix 5
5
A
87 100Right-handed alpha
Helix 6
6
A
124 128Right-handed 310
Helix 7
7
A
158 170Right-handed alpha
Helix 8
8
A
186 188Right-handed 310
Helix 9
9
A
189 194Right-handed alpha
Helix 10
10
A
203 222Right-handed alpha
Helix 11
11
A
234 241Right-handed alpha
Helix 12
12
A
246 251Right-handed alpha
Helix 13
13
A
256 273Right-handed alpha
Helix 14
14
A
303 313Right-handed alpha
Helix 15
15
A
314 318Right-handed 310
Helix 16
16
A
326 332Right-handed alpha
Helix 17
17
A
333 336Right-handed 310
Helix 18
18
A
337 350Right-handed alpha
Helix 19
19
A
367 384Right-handed alpha
Helix 20
20
A
397 409Right-handed alpha
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There are 6 sheets in PDB entry 2E0P. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
420 426anti-parallel
Strand 3
A
432 439anti-parallel
Strand 4
A
442 452anti-parallel
Strand 5
A
508 515anti-parallel
Strand 6
A
473 480anti-parallel
Strand 7
A
483 492anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
420 426anti-parallel
Strand 3
A
8 15anti-parallel
Strand 4
A
459 466parallel
Strand 5
A
499 504anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
41 43parallel
Strand 3
A
105 109parallel
Strand 4
A
180 183parallel
Strand 5
A
226 232parallel
Strand 6
A
279 284parallel
Strand 7
A
354 360parallel
Strand 8
A
388 391parallel
Strand 9
A
26 30parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
67 69anti-parallel
Strand 3
A
121 122anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 116first strand
Strand 2
A
134 138anti-parallel
Strand 3
A
155 157parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 290first strand
Strand 2
A
293 294anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il