Analysis of interatomic Contacts of Structural Units in PDB entry:
2E4V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E4V entry

There are 2 chains in PDB entry 2E4V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 30GLU 567
B
 PHE 28GLU 567
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 2E4V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 82Right-handed alpha
Helix 2
2
A
101 115Right-handed alpha
Helix 3
3
A
150 162Right-handed alpha
Helix 4
4
A
163 165Right-handed 310
Helix 5
5
A
175 180Right-handed 310
Helix 6
6
A
193 208Right-handed alpha
Helix 7
7
A
222 237Right-handed alpha
Helix 8
8
A
252 265Right-handed alpha
Helix 9
9
A
277 291Right-handed alpha
Helix 10
10
A
306 310Right-handed 310
Helix 11
11
A
313 318Right-handed alpha
Helix 12
12
A
330 339Right-handed alpha
Helix 13
13
A
350 359Right-handed alpha
Helix 14
14
A
389 412Right-handed alpha
Helix 15
15
A
419 423Right-handed 310
Helix 16
16
A
426 435Right-handed alpha
Helix 17
17
A
493 497Right-handed 310
Helix 18
18
A
499 503Right-handed 310
Helix 19
19
B
65 80Right-handed alpha
Helix 20
20
B
101 115Right-handed alpha
Helix 21
21
B
150 162Right-handed alpha
Helix 22
22
B
163 165Right-handed 310
Helix 23
23
B
175 180Right-handed 310
Helix 24
24
B
193 208Right-handed alpha
Helix 25
25
B
222 237Right-handed alpha
Helix 26
26
B
252 265Right-handed alpha
Helix 27
27
B
277 291Right-handed alpha
Helix 28
28
B
313 318Right-handed alpha
Helix 29
29
B
330 339Right-handed alpha
Helix 30
30
B
350 360Right-handed alpha
Helix 31
31
B
389 412Right-handed alpha
Helix 32
32
B
419 423Right-handed 310
Helix 33
33
B
426 435Right-handed alpha
Helix 34
34
B
494 497Right-handed 310
Helix 35
35
B
499 503Right-handed 310
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There are 14 sheets in PDB entry 2E4V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
91 97anti-parallel
Strand 3
A
39 45parallel
Strand 4
A
142 147parallel
Strand 5
A
168 170parallel
Strand 6
A
187 189parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
57 60anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 247first strand
Strand 2
A
212 218parallel
Strand 3
A
271 275parallel
Strand 4
A
296 299parallel
Strand 5
A
321 325parallel
Strand 6
A
466 472anti-parallel
Strand 7
A
479 486anti-parallel
Strand 8
A
490 491anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 440first strand
Strand 2
A
453 455anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
518 521first strand
Strand 2
A
530 533anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
538 542first strand
Strand 2
A
545 548anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
553 555first strand
Strand 2
A
562 564anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 35first strand
Strand 2
B
91 97anti-parallel
Strand 3
B
39 45parallel
Strand 4
B
142 147parallel
Strand 5
B
168 170parallel
Strand 6
B
187 189parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 50first strand
Strand 2
B
57 60anti-parallel
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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
240 247first strand
Strand 2
B
212 218parallel
Strand 3
B
271 275parallel
Strand 4
B
296 299parallel
Strand 5
B
321 325parallel
Strand 6
B
466 472anti-parallel
Strand 7
B
479 486anti-parallel
Strand 8
B
490 492anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
439 440first strand
Strand 2
B
453 454anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
518 521first strand
Strand 2
B
530 533anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
538 542first strand
Strand 2
B
545 548anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
553 555first strand
Strand 2
B
562 564anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il