Analysis of interatomic Contacts of Structural Units in PDB entry:
2E5W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E5W entry

There are 4 chains in PDB entry 2E5W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 280
B
 MET 4LEU 280
C
 MET 1LEU 280
D
 MET 4LEU 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 2E5W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
59 74Right-handed alpha
Helix 2
2
A
88 95Right-handed alpha
Helix 3
3
A
109 120Right-handed alpha
Helix 4
4
A
125 132Right-handed alpha
Helix 5
5
A
144 150Right-handed alpha
Helix 6
6
A
169 173Right-handed 310
Helix 7
7
A
174 184Right-handed alpha
Helix 8
8
A
201 214Right-handed alpha
Helix 9
9
A
249 255Right-handed alpha
Helix 10
10
A
262 271Right-handed 310
Helix 11
11
A
273 278Right-handed alpha
Helix 12
12
B
59 74Right-handed alpha
Helix 13
13
B
88 95Right-handed alpha
Helix 14
14
B
109 120Right-handed alpha
Helix 15
15
B
125 132Right-handed alpha
Helix 16
16
B
144 152Right-handed alpha
Helix 17
17
B
174 184Right-handed alpha
Helix 18
18
B
201 214Right-handed alpha
Helix 19
19
B
249 255Right-handed alpha
Helix 20
20
B
262 271Right-handed 310
Helix 21
21
B
273 278Right-handed alpha
Helix 22
22
C
59 74Right-handed alpha
Helix 23
23
C
88 95Right-handed alpha
Helix 24
24
C
109 120Right-handed alpha
Helix 25
25
C
125 132Right-handed alpha
Helix 26
26
C
144 152Right-handed alpha
Helix 27
27
C
169 173Right-handed 310
Helix 28
28
C
174 184Right-handed alpha
Helix 29
29
C
201 214Right-handed alpha
Helix 30
30
C
249 255Right-handed alpha
Helix 31
31
C
262 271Right-handed 310
Helix 32
32
C
273 278Right-handed alpha
Helix 33
33
D
59 74Right-handed alpha
Helix 34
34
D
88 95Right-handed alpha
Helix 35
35
D
109 120Right-handed alpha
Helix 36
36
D
125 132Right-handed alpha
Helix 37
37
D
144 152Right-handed alpha
Helix 38
38
D
174 184Right-handed alpha
Helix 39
39
D
201 214Right-handed alpha
Helix 40
40
D
249 255Right-handed alpha
Helix 41
41
D
262 271Right-handed 310
Helix 42
42
D
273 280Right-handed alpha
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There are 8 sheets in PDB entry 2E5W. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 10first strand
Strand 2
A
14 28anti-parallel
Strand 3
B
14 28anti-parallel
Strand 4
B
5 10anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 55first strand
Strand 2
A
44 48anti-parallel
Strand 3
A
33 39anti-parallel
Strand 4
A
14 28anti-parallel
Strand 5
B
14 28anti-parallel
Strand 6
B
33 39anti-parallel
Strand 7
B
44 48anti-parallel
Strand 8
B
51 55anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 142first strand
Strand 2
A
102 107parallel
Strand 3
A
79 84parallel
Strand 4
A
155 161parallel
Strand 5
A
185 197parallel
Strand 6
A
233 240anti-parallel
Strand 7
A
218 224anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 142first strand
Strand 2
B
102 107parallel
Strand 3
B
79 84parallel
Strand 4
B
155 161parallel
Strand 5
B
185 197parallel
Strand 6
B
233 240anti-parallel
Strand 7
B
218 224anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 10first strand
Strand 2
C
14 28anti-parallel
Strand 3
D
14 28anti-parallel
Strand 4
D
5 10anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 55first strand
Strand 2
C
44 48anti-parallel
Strand 3
C
33 39anti-parallel
Strand 4
C
14 28anti-parallel
Strand 5
D
14 28anti-parallel
Strand 6
D
33 39anti-parallel
Strand 7
D
44 48anti-parallel
Strand 8
D
51 55anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
138 142first strand
Strand 2
C
102 107parallel
Strand 3
C
79 84parallel
Strand 4
C
155 161parallel
Strand 5
C
185 197parallel
Strand 6
C
233 240anti-parallel
Strand 7
C
218 224anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
138 142first strand
Strand 2
D
102 107parallel
Strand 3
D
79 84parallel
Strand 4
D
155 161parallel
Strand 5
D
185 197parallel
Strand 6
D
233 240anti-parallel
Strand 7
D
218 224anti-parallel
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