Analysis of interatomic Contacts of Structural Units in PDB entry:
2E7Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E7Y entry

There are 2 chains in PDB entry 2E7Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 280
B
 MET 1MET 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 2E7Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 35Right-handed alpha
Helix 2
2
A
36 41Right-handed 310
Helix 3
3
A
50 55Right-handed alpha
Helix 4
4
A
56 68Right-handed alpha
Helix 5
5
A
69 72Right-handed 310
Helix 6
6
A
83 97Right-handed alpha
Helix 7
7
A
98 101Right-handed 310
Helix 8
8
A
154 157Right-handed 310
Helix 9
9
A
160 172Right-handed alpha
Helix 10
10
A
173 175Right-handed 310
Helix 11
11
A
195 200Right-handed alpha
Helix 12
12
A
224 236Right-handed alpha
Helix 13
13
A
246 248Right-handed 310
Helix 14
14
A
249 264Right-handed alpha
Helix 15
15
B
29 35Right-handed alpha
Helix 16
16
B
36 41Right-handed 310
Helix 17
17
B
50 55Right-handed alpha
Helix 18
18
B
56 66Right-handed alpha
Helix 19
19
B
83 97Right-handed alpha
Helix 20
20
B
98 101Right-handed 310
Helix 21
21
B
154 157Right-handed 310
Helix 22
22
B
160 172Right-handed alpha
Helix 23
23
B
172 176Right-handed alpha
Helix 24
24
B
195 200Right-handed alpha
Helix 25
25
B
213 217Right-handed 310
Helix 26
26
B
224 235Right-handed alpha
Helix 27
27
B
251 264Right-handed alpha
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There are 4 sheets in PDB entry 2E7Y. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 109first strand
Strand 2
A
75 80parallel
Strand 3
A
43 45parallel
Strand 4
A
22 26parallel
Strand 5
A
12 17anti-parallel
Strand 6
A
3 8anti-parallel
Strand 7
A
278 280anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 116first strand
Strand 2
A
125 131anti-parallel
Strand 3
A
141 152anti-parallel
Strand 4
A
177 187anti-parallel
Strand 5
A
205 208parallel
Strand 6
A
239 243parallel
Strand 7
A
268 271parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 109first strand
Strand 2
B
75 80parallel
Strand 3
B
43 45parallel
Strand 4
B
22 24parallel
Strand 5
B
12 17anti-parallel
Strand 6
B
3 8anti-parallel
Strand 7
B
278 280anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 116first strand
Strand 2
B
125 131anti-parallel
Strand 3
B
141 152anti-parallel
Strand 4
B
177 187anti-parallel
Strand 5
B
204 208parallel
Strand 6
B
239 243parallel
Strand 7
B
268 271parallel
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