Analysis of interatomic Contacts of Structural Units in PDB entry:
2E9C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E9C entry

There are 2 chains in PDB entry 2E9C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 14GLU 240
B
 GLY 17ARG 239
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2E9C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 36Right-handed alpha
Helix 2
2
A
38 60Right-handed alpha
Helix 3
3
A
95 103Right-handed alpha
Helix 4
4
A
117 132Right-handed alpha
Helix 5
5
A
146 164Right-handed alpha
Helix 6
6
A
168 172Right-handed 310
Helix 7
7
A
173 179Right-handed alpha
Helix 8
8
A
206 210Right-handed 310
Helix 9
9
A
220 224Right-handed 310
Helix 10
10
A
225 240Right-handed alpha
Helix 11
11
B
27 35Right-handed alpha
Helix 12
12
B
38 60Right-handed alpha
Helix 13
13
B
83 103Right-handed alpha
Helix 14
14
B
117 132Right-handed alpha
Helix 15
15
B
146 164Right-handed alpha
Helix 16
16
B
173 179Right-handed alpha
Helix 17
17
B
206 210Right-handed 310
Helix 18
18
B
220 224Right-handed 310
Helix 19
19
B
225 239Right-handed alpha
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There are 2 sheets in PDB entry 2E9C. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 110first strand
Strand 2
A
138 142parallel
Strand 3
A
64 69parallel
Strand 4
A
20 25parallel
Strand 5
A
191 194parallel
Strand 6
A
213 216parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 110first strand
Strand 2
B
138 142parallel
Strand 3
B
64 69parallel
Strand 4
B
20 25parallel
Strand 5
B
191 194parallel
Strand 6
B
213 216parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il