Analysis of interatomic Contacts of Structural Units in PDB entry:
2EFJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EFJ entry

There is 1 chain in PDB entry 2EFJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3PRO 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2EFJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 22Right-handed alpha
Helix 2
2
A
27 45Right-handed alpha
Helix 3
3
A
64 79Right-handed alpha
Helix 4
4
A
105 124Right-handed alpha
Helix 5
5
A
189 214Right-handed alpha
Helix 6
6
A
236 251Right-handed alpha
Helix 7
7
A
255 261Right-handed alpha
Helix 8
8
A
270 282Right-handed alpha
Helix 9
9
A
314 342Right-handed alpha
Helix 10
10
A
345 364Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2EFJ.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 135first strand
Strand 2
A
93 99parallel
Strand 3
A
53 59parallel
Strand 4
A
150 156parallel
Strand 5
A
215 226parallel
Strand 6
A
367 377anti-parallel
Strand 7
A
284 295anti-parallel
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