Analysis of interatomic Contacts of Structural Units in PDB entry:
2EJT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EJT entry

There is 1 chain in PDB entry 2EJT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3ARG 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 2EJT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 31Right-handed 310
Helix 2
2
A
32 47Right-handed alpha
Helix 3
3
A
59 69Right-handed alpha
Helix 4
4
A
80 95Right-handed alpha
Helix 5
5
A
120 128Right-handed alpha
Helix 6
6
A
143 153Right-handed alpha
Helix 7
7
A
166 171Right-handed alpha
Helix 8
8
A
174 183Right-handed alpha
Helix 9
9
A
191 210Right-handed alpha
Helix 10
10
A
236 245Right-handed alpha
Helix 11
11
A
283 296Right-handed alpha
Helix 12
12
A
301 315Right-handed alpha
Helix 13
13
A
324 332Right-handed alpha
Helix 14
14
A
337 348Right-handed alpha
Helix 15
15
A
367 376Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2EJT. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
11 15anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
105 109anti-parallel
Strand 3
A
113 118anti-parallel
Strand 4
A
73 78parallel
Strand 5
A
50 53parallel
Strand 6
A
132 137parallel
Strand 7
A
154 164parallel
Strand 8
A
226 235anti-parallel
Strand 9
A
213 223anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 263first strand
Strand 2
A
247 252anti-parallel
Strand 3
A
273 277anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 323first strand
Strand 2
A
358 364anti-parallel
Strand 3
A
352 355anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il