Analysis of interatomic Contacts of Structural Units in PDB entry:
2EWW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EWW entry

There is 1 chain in PDB entry 2EWW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 12MSE 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2EWW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 25Right-handed alpha
Helix 2
2
A
59 66Right-handed alpha
Helix 3
3
A
69 79Right-handed alpha
Helix 4
4
A
118 123Right-handed alpha
Helix 5
5
A
127 134Right-handed 310
Helix 6
6
A
148 164Right-handed alpha
Helix 7
7
A
197 206Right-handed alpha
Helix 8
8
A
220 232Right-handed alpha
Helix 9
9
A
245 255Right-handed alpha
Helix 10
10
A
261 272Right-handed alpha
Helix 11
11
A
299 308Right-handed alpha
Helix 12
12
A
313 318Right-handed alpha
Helix 13
13
A
329 340Right-handed alpha
Helix 14
14
A
344 352Right-handed alpha
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There are 2 sheets in PDB entry 2EWW. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
39 42anti-parallel
Strand 3
A
29 32anti-parallel
Strand 4
A
105 112anti-parallel
Strand 5
A
93 100anti-parallel
Strand 6
A
81 87anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 190first strand
Strand 2
A
167 172parallel
Strand 3
A
212 215parallel
Strand 4
A
236 240parallel
Strand 5
A
137 142parallel
Strand 6
A
273 282parallel
Strand 7
A
290 296anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il