Analysis of interatomic Contacts of Structural Units in PDB entry:
2FN8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FN8 entry

There is 1 chain in PDB entry 2FN8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1LYS 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2FN8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 30Right-handed alpha
Helix 2
2
A
42 56Right-handed alpha
Helix 3
3
A
71 81Right-handed alpha
Helix 4
4
A
105 125Right-handed alpha
Helix 5
5
A
142 157Right-handed alpha
Helix 6
6
A
173 188Right-handed alpha
Helix 7
7
A
198 212Right-handed alpha
Helix 8
8
A
225 234Right-handed alpha
Helix 9
9
A
245 262Right-handed alpha
Helix 10
10
A
282 284Right-handed 310
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There are 3 sheets in PDB entry 2FN8. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
A
3 8parallel
Strand 3
A
60 63parallel
Strand 4
A
85 88parallel
Strand 5
A
100 104parallel
Strand 6
A
270 273parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 169first strand
Strand 2
A
131 137parallel
Strand 3
A
193 196parallel
Strand 4
A
218 220parallel
Strand 5
A
238 243parallel
Strand 6
A
276 279anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
A
290 291anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il