Analysis of interatomic Contacts of Structural Units in PDB entry:
2G2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G2H entry

There are 2 chains in PDB entry 2G2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 252ASP 523
B
 ASP 252ASP 523
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 2G2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
257 259Right-handed 310
Helix 2
2
A
268 271Right-handed 310
Helix 3
3
A
282 284Right-handed 310
Helix 4
4
A
298 310Right-handed alpha
Helix 5
5
A
341 349Right-handed alpha
Helix 6
6
A
355 376Right-handed alpha
Helix 7
7
A
384 386Right-handed 310
Helix 8
8
A
392 394Right-handed 310
Helix 9
9
A
421 425Right-handed 310
Helix 10
10
A
426 433Right-handed alpha
Helix 11
11
A
436 453Right-handed alpha
Helix 12
12
A
463 465Right-handed 310
Helix 13
13
A
466 473Right-handed alpha
Helix 14
14
A
484 495Right-handed alpha
Helix 15
15
A
498 502Right-handed 310
Helix 16
16
A
504 521Right-handed alpha
Helix 17
17
B
257 259Right-handed 310
Helix 18
18
B
268 271Right-handed 310
Helix 19
19
B
298 312Right-handed alpha
Helix 20
20
B
341 349Right-handed alpha
Helix 21
21
B
355 376Right-handed alpha
Helix 22
22
B
384 386Right-handed 310
Helix 23
23
B
392 394Right-handed 310
Helix 24
24
B
421 425Right-handed 310
Helix 25
25
B
426 433Right-handed alpha
Helix 26
26
B
436 453Right-handed alpha
Helix 27
27
B
463 465Right-handed 310
Helix 28
28
B
466 473Right-handed alpha
Helix 29
29
B
484 495Right-handed alpha
Helix 30
30
B
498 502Right-handed 310
Helix 31
31
B
504 519Right-handed alpha
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There are 8 sheets in PDB entry 2G2H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 266first strand
Strand 2
A
274 280anti-parallel
Strand 3
A
285 291anti-parallel
Strand 4
A
331 335anti-parallel
Strand 5
A
320 324anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 380first strand
Strand 2
A
403 405anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 391first strand
Strand 2
A
395 398anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
412 413first strand
Strand 2
A
434 435anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 266first strand
Strand 2
B
275 280anti-parallel
Strand 3
B
285 292anti-parallel
Strand 4
B
330 335anti-parallel
Strand 5
B
320 324anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
378 380first strand
Strand 2
B
403 405anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
388 390first strand
Strand 2
B
396 398anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
412 413first strand
Strand 2
B
434 435anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il