Analysis of interatomic Contacts of Structural Units in PDB entry:
2G2Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G2Y entry

There is 1 chain in PDB entry 2G2Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 3LEU 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2G2Y. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
19 26Right-handed alpha
Helix 2
2
A
27 41Right-handed alpha
Helix 3
3
A
43 51Right-handed alpha
Helix 4
4
A
52 57Right-handed alpha
Helix 5
5
A
58 80Right-handed alpha
Helix 6
6
A
92 102Right-handed alpha
Helix 7
7
A
106 124Right-handed alpha
Helix 8
8
A
139 152Right-handed alpha
Helix 9
9
A
173 186Right-handed alpha
Helix 10
10
A
202 204Right-handed 310
Helix 11
11
A
205 217Right-handed alpha
Helix 12
12
A
239 253Right-handed alpha
Helix 13
13
A
257 267Right-handed alpha
Helix 14
14
A
279 289Right-handed alpha
Helix 15
15
A
299 307Right-handed alpha
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There are 2 sheets in PDB entry 2G2Y. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
87 90first strand
Strand 2
A
4 8parallel
Strand 3
A
271 274parallel
Strand 4
A
293 296parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
190 193first strand
Strand 2
A
130 136anti-parallel
Strand 3
A
166 172anti-parallel
Strand 4
A
156 163anti-parallel
Strand 5
A
255 256parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il