Analysis of interatomic Contacts of Structural Units in PDB entry:
2GR9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GR9 entry

There are 5 chains in PDB entry 2GR9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG -1GLU 275
B
 ARG -1GLU 275
C
 ARG -1GLU 275
D
 ARG -1GLU 275
E
 ARG -1GLU 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 2GR9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 22Right-handed alpha
Helix 2
2
A
39 49Right-handed alpha
Helix 3
3
A
57 63Right-handed alpha
Helix 4
4
A
75 83Right-handed alpha
Helix 5
5
A
84 86Right-handed 310
Helix 6
6
A
100 106Right-handed alpha
Helix 7
7
A
108 112Right-handed 310
Helix 8
8
A
123 128Right-handed 310
Helix 9
9
A
142 153Right-handed alpha
Helix 10
10
A
163 165Right-handed 310
Helix 11
11
A
166 194Right-handed alpha
Helix 12
12
A
198 219Right-handed alpha
Helix 13
13
A
223 231Right-handed alpha
Helix 14
14
A
238 248Right-handed alpha
Helix 15
15
A
249 270Right-handed alpha
Helix 16
16
B
9 18Right-handed alpha
Helix 17
17
B
41 46Right-handed alpha
Helix 18
18
B
47 49Right-handed 310
Helix 19
19
B
57 61Right-handed 310
Helix 20
20
B
82 86Right-handed 310
Helix 21
21
B
100 104Right-handed 310
Helix 22
22
B
123 128Right-handed 310
Helix 23
23
B
146 154Right-handed alpha
Helix 24
24
B
164 175Right-handed alpha
Helix 25
25
B
176 196Right-handed alpha
Helix 26
26
B
198 221Right-handed alpha
Helix 27
27
B
223 230Right-handed alpha
Helix 28
28
B
237 246Right-handed alpha
Helix 29
29
B
249 273Right-handed alpha
Helix 30
30
C
9 23Right-handed alpha
Helix 31
31
C
45 50Right-handed alpha
Helix 32
32
C
57 61Right-handed 310
Helix 33
33
C
71 73Right-handed 310
Helix 34
34
C
74 83Right-handed alpha
Helix 35
35
C
84 86Right-handed 310
Helix 36
36
C
100 105Right-handed alpha
Helix 37
37
C
124 128Right-handed 310
Helix 38
38
C
148 153Right-handed alpha
Helix 39
39
C
163 173Right-handed alpha
Helix 40
40
C
176 195Right-handed alpha
Helix 41
41
C
198 220Right-handed alpha
Helix 42
42
C
223 231Right-handed alpha
Helix 43
43
C
237 247Right-handed alpha
Helix 44
44
C
250 255Right-handed alpha
Helix 45
45
C
259 270Right-handed alpha
Helix 46
46
D
9 23Right-handed alpha
Helix 47
47
D
26 28Right-handed 310
Helix 48
48
D
40 49Right-handed alpha
Helix 49
49
D
55 62Right-handed alpha
Helix 50
50
D
73 84Right-handed alpha
Helix 51
51
D
100 109Right-handed alpha
Helix 52
52
D
123 128Right-handed 310
Helix 53
53
D
142 153Right-handed alpha
Helix 54
54
D
168 173Right-handed alpha
Helix 55
55
D
176 195Right-handed alpha
Helix 56
56
D
198 219Right-handed alpha
Helix 57
57
D
223 231Right-handed alpha
Helix 58
58
D
237 247Right-handed alpha
Helix 59
59
D
249 270Right-handed alpha
Helix 60
60
E
9 22Right-handed alpha
Helix 61
61
E
26 28Right-handed 310
Helix 62
62
E
41 48Right-handed alpha
Helix 63
63
E
55 63Right-handed alpha
Helix 64
64
E
74 83Right-handed alpha
Helix 65
65
E
101 106Right-handed alpha
Helix 66
66
E
123 129Right-handed 310
Helix 67
67
E
144 154Right-handed alpha
Helix 68
68
E
163 167Right-handed 310
Helix 69
69
E
168 173Right-handed alpha
Helix 70
70
E
176 195Right-handed alpha
Helix 71
71
E
198 218Right-handed alpha
Helix 72
72
E
223 230Right-handed alpha
Helix 73
73
E
237 246Right-handed alpha
Helix 74
74
E
249 270Right-handed alpha
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There are 7 sheets in PDB entry 2GR9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
30 33parallel
Strand 3
A
3 5parallel
Strand 4
A
65 68parallel
Strand 5
A
91 94parallel
Strand 6
A
117 121parallel
Strand 7
A
131 137anti-parallel
Strand 8
A
157 161parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 67first strand
Strand 2
B
91 93parallel
Strand 3
B
117 118parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 121first strand
Strand 2
B
134 135anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 4first strand
Strand 2
C
30 31parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
117 122first strand
Strand 2
C
131 138anti-parallel
Strand 3
C
157 161parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
51 53first strand
Strand 2
D
30 33parallel
Strand 3
D
3 6parallel
Strand 4
D
65 68parallel
Strand 5
D
91 95parallel
Strand 6
D
117 121parallel
Strand 7
D
131 137anti-parallel
Strand 8
D
157 161parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
51 53first strand
Strand 2
E
30 33parallel
Strand 3
E
3 6parallel
Strand 4
E
65 68parallel
Strand 5
E
91 94parallel
Strand 6
E
117 121parallel
Strand 7
E
131 137anti-parallel
Strand 8
E
157 161parallel
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