Analysis of interatomic Contacts of Structural Units in PDB entry:
2GX6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2GX6 entry

There is 1 chain in PDB entry 2GX6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1GLN 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2GX6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 31Right-handed alpha
Helix 2
2
A
42 56Right-handed alpha
Helix 3
3
A
71 81Right-handed alpha
Helix 4
4
A
104 121Right-handed alpha
Helix 5
5
A
135 152Right-handed alpha
Helix 6
6
A
165 180Right-handed alpha
Helix 7
7
A
190 204Right-handed alpha
Helix 8
8
A
217 226Right-handed alpha
Helix 9
9
A
236 254Right-handed alpha
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There are 3 sheets in PDB entry 2GX6. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
A
3 8parallel
Strand 3
A
60 63parallel
Strand 4
A
85 88parallel
Strand 5
A
99 103parallel
Strand 6
A
260 263parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 161first strand
Strand 2
A
125 130parallel
Strand 3
A
185 188parallel
Strand 4
A
210 212parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 234first strand
Strand 2
A
266 269anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il