Analysis of interatomic Contacts of Structural Units in PDB entry:
2H11


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H11 entry

There are 2 chains in PDB entry 2H11 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 17LYS 245
B
 GLU 17LYS 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2H11. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 35Right-handed alpha
Helix 2
2
A
46 57Right-handed alpha
Helix 3
3
A
74 81Right-handed alpha
Helix 4
4
A
92 103Right-handed alpha
Helix 5
5
A
134 141Right-handed 310
Helix 6
6
A
159 161Right-handed 310
Helix 7
7
A
162 172Right-handed alpha
Helix 8
8
A
200 209Right-handed alpha
Helix 9
9
A
224 231Right-handed 310
Helix 10
10
B
25 35Right-handed alpha
Helix 11
11
B
46 57Right-handed alpha
Helix 12
12
B
74 82Right-handed alpha
Helix 13
13
B
92 103Right-handed alpha
Helix 14
14
B
134 141Right-handed 310
Helix 15
15
B
159 161Right-handed 310
Helix 16
16
B
162 172Right-handed alpha
Helix 17
17
B
200 209Right-handed alpha
Helix 18
18
B
224 231Right-handed 310
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There are 2 sheets in PDB entry 2H11. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 111first strand
Strand 2
A
119 123anti-parallel
Strand 3
A
128 132anti-parallel
Strand 4
A
85 89parallel
Strand 5
A
64 67parallel
Strand 6
A
146 151parallel
Strand 7
A
174 186parallel
Strand 8
A
236 244anti-parallel
Strand 9
A
212 221anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 111first strand
Strand 2
B
119 123anti-parallel
Strand 3
B
128 132anti-parallel
Strand 4
B
85 89parallel
Strand 5
B
64 68parallel
Strand 6
B
146 151parallel
Strand 7
B
174 186parallel
Strand 8
B
236 244anti-parallel
Strand 9
B
212 221anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il