Analysis of interatomic Contacts of Structural Units in PDB entry:
2H3L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H3L entry

There are 2 chains in PDB entry 2H3L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1310SER 1412
B
 GLY 1314SER 1411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 2H3L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1387 1398Right-handed alpha
Helix 2
2
B
1387 1398Right-handed alpha
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There are 4 sheets in PDB entry 2H3L. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1318 1327first strand
Strand 2
A
1401 1410anti-parallel
Strand 3
A
1374 1378anti-parallel
Strand 4
A
1354 1359anti-parallel
Strand 5
A
1334 1338anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1318 1327first strand
Strand 2
A
1401 1410anti-parallel
Strand 3
A
1374 1378anti-parallel
Strand 4
A
1381 1382anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1318 1327first strand
Strand 2
B
1401 1410anti-parallel
Strand 3
B
1374 1378anti-parallel
Strand 4
B
1354 1359anti-parallel
Strand 5
B
1334 1338anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1318 1327first strand
Strand 2
B
1401 1410anti-parallel
Strand 3
B
1374 1378anti-parallel
Strand 4
B
1381 1382anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il