Analysis of interatomic Contacts of Structural Units in PDB entry:
2H51


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H51 entry

There are 3 chains in PDB entry 2H51 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 128ASP 297
B
ILE 318HIS 404
C
VAL 2ASP 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 2H51. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
137 145Right-handed alpha
Helix 2
2
A
181 196Right-handed alpha
Helix 3
3
A
207 220Right-handed alpha
Helix 4
4
A
221 227Right-handed 310
Helix 5
5
A
257 266Right-handed alpha
Helix 6
6
A
270 274Right-handed 310
Helix 7
7
B
348 361Right-handed alpha
Helix 8
8
B
365 377Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 2H51. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
199 204first strand
Strand 2
A
164 169parallel
Strand 3
A
230 235parallel
Strand 4
A
278 283parallel
Strand 5
B
327 331parallel
Strand 6
B
388 390anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
238 239first strand
Strand 2
A
242 244anti-parallel
Strand 3
A
255 256anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
341 342first strand
Strand 2
B
346 347anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il