Analysis of interatomic Contacts of Structural Units in PDB entry:
2H7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H7V entry

There are 4 chains in PDB entry 2H7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1CYS 178
B
 GLY 1PRO 179
C
 ARG 439MET 732
D
 THR 441MET 732
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 40 helices in PDB entry 2H7V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 26Right-handed alpha
Helix 2
2
A
62 68Right-handed alpha
Helix 3
3
A
69 72Right-handed 310
Helix 4
4
A
86 96Right-handed alpha
Helix 5
5
A
96 105Right-handed alpha
Helix 6
6
A
116 121Right-handed 310
Helix 7
7
A
122 131Right-handed alpha
Helix 8
8
A
138 149Right-handed alpha
Helix 9
9
A
164 177Right-handed alpha
Helix 10
10
B
15 26Right-handed alpha
Helix 11
11
B
63 68Right-handed alpha
Helix 12
12
B
69 72Right-handed 310
Helix 13
13
B
86 96Right-handed alpha
Helix 14
14
B
96 105Right-handed alpha
Helix 15
15
B
116 121Right-handed 310
Helix 16
16
B
122 131Right-handed alpha
Helix 17
17
B
138 150Right-handed alpha
Helix 18
18
B
164 178Right-handed alpha
Helix 19
19
C
441 461Right-handed alpha
Helix 20
20
C
465 485Right-handed alpha
Helix 21
21
C
490 513Right-handed alpha
Helix 22
22
C
533 548Right-handed alpha
Helix 23
23
C
558 581Right-handed alpha
Helix 24
24
C
587 630Right-handed alpha
Helix 25
25
C
632 645Right-handed alpha
Helix 26
26
C
658 676Right-handed alpha
Helix 27
27
C
679 698Right-handed alpha
Helix 28
28
C
704 732Right-handed alpha
Helix 29
29
D
444 461Right-handed alpha
Helix 30
30
D
465 484Right-handed alpha
Helix 31
31
D
490 492Right-handed 310
Helix 32
32
D
493 511Right-handed alpha
Helix 33
33
D
534 539Right-handed alpha
Helix 34
34
D
539 550Right-handed alpha
Helix 35
35
D
555 557Right-handed 310
Helix 36
36
D
558 583Right-handed alpha
Helix 37
37
D
587 645Right-handed alpha
Helix 38
38
D
658 676Right-handed alpha
Helix 39
39
D
679 698Right-handed alpha
Helix 40
40
D
704 732Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2H7V. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 46first strand
Strand 2
A
49 56anti-parallel
Strand 3
A
2 9parallel
Strand 4
A
77 83parallel
Strand 5
A
110 115parallel
Strand 6
A
153 156parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 44first strand
Strand 2
B
51 56anti-parallel
Strand 3
B
2 10parallel
Strand 4
B
77 83parallel
Strand 5
B
110 115parallel
Strand 6
B
153 156parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il