Analysis of interatomic Contacts of Structural Units in PDB entry:
2H8L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H8L entry

There are 3 chains in PDB entry 2H8L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 134LEU 365
B
 ALA 135TYR 364
C
 PRO 134LEU 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2H8L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
141 150Right-handed alpha
Helix 2
2
A
165 178Right-handed alpha
Helix 3
3
A
189 197Right-handed alpha
Helix 4
4
A
208 212Right-handed 310
Helix 5
5
A
228 240Right-handed alpha
Helix 6
6
A
251 256Right-handed alpha
Helix 7
7
A
272 293Right-handed alpha
Helix 8
8
A
307 312Right-handed alpha
Helix 9
9
A
313 315Right-handed 310
Helix 10
10
A
346 359Right-handed alpha
Helix 11
11
B
141 150Right-handed alpha
Helix 12
12
B
165 178Right-handed alpha
Helix 13
13
B
189 197Right-handed alpha
Helix 14
14
B
208 212Right-handed 310
Helix 15
15
B
228 240Right-handed alpha
Helix 16
16
B
251 256Right-handed alpha
Helix 17
17
B
272 293Right-handed alpha
Helix 18
18
B
309 313Right-handed 310
Helix 19
19
B
346 359Right-handed alpha
Helix 20
20
C
141 150Right-handed alpha
Helix 21
21
C
165 179Right-handed alpha
Helix 22
22
C
189 197Right-handed alpha
Helix 23
23
C
208 212Right-handed 310
Helix 24
24
C
228 240Right-handed alpha
Helix 25
25
C
251 256Right-handed alpha
Helix 26
26
C
272 293Right-handed alpha
Helix 27
27
C
307 313Right-handed alpha
Helix 28
28
C
346 359Right-handed alpha
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There are 6 sheets in PDB entry 2H8L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
183 187parallel
Strand 3
A
155 160parallel
Strand 4
A
201 206anti-parallel
Strand 5
A
219 221anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 303first strand
Strand 2
A
260 265parallel
Strand 3
A
325 329anti-parallel
Strand 4
A
335 337anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 139first strand
Strand 2
B
184 187parallel
Strand 3
B
155 160parallel
Strand 4
B
201 206anti-parallel
Strand 5
B
219 221anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 247first strand
Strand 2
B
298 303parallel
Strand 3
B
260 265parallel
Strand 4
B
325 329anti-parallel
Strand 5
B
335 337anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
136 138first strand
Strand 2
C
184 187parallel
Strand 3
C
155 160parallel
Strand 4
C
201 206anti-parallel
Strand 5
C
219 221anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
246 247first strand
Strand 2
C
298 303parallel
Strand 3
C
260 265parallel
Strand 4
C
325 329anti-parallel
Strand 5
C
335 337anti-parallel
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