Analysis of interatomic Contacts of Structural Units in PDB entry:
2HVH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HVH entry

There are 8 chains in PDB entry 2HVH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 C 21 C 28
C
 T 2 T 2
C
 C 4 G 12
E
 C 21 C 28
F
 T 2 T 2
F
 C 4 G 12
A
 LYS 297LYS 876
D
 LYS 297LYS 876
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 2HVH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
308 312Right-handed 310
Helix 2
2
A
347 352Right-handed alpha
Helix 3
3
A
354 363Right-handed alpha
Helix 4
4
A
372 382Right-handed alpha
Helix 5
5
A
394 402Right-handed alpha
Helix 6
6
A
403 406Right-handed 310
Helix 7
7
A
409 416Right-handed alpha
Helix 8
8
A
425 430Right-handed alpha
Helix 9
9
A
431 435Right-handed 310
Helix 10
10
A
439 468Right-handed alpha
Helix 11
11
A
470 477Right-handed alpha
Helix 12
12
A
477 492Right-handed alpha
Helix 13
13
A
496 523Right-handed alpha
Helix 14
14
A
530 540Right-handed alpha
Helix 15
15
A
557 564Right-handed alpha
Helix 16
16
A
565 568Right-handed 310
Helix 17
17
A
569 586Right-handed alpha
Helix 18
18
A
588 595Right-handed alpha
Helix 19
19
A
630 635Right-handed alpha
Helix 20
20
A
636 638Right-handed 310
Helix 21
21
A
656 667Right-handed alpha
Helix 22
22
A
668 678Right-handed alpha
Helix 23
23
A
680 691Right-handed alpha
Helix 24
24
A
698 703Right-handed 310
Helix 25
25
A
705 714Right-handed alpha
Helix 26
26
A
717 726Right-handed alpha
Helix 27
27
A
728 743Right-handed alpha
Helix 28
28
A
743 761Right-handed alpha
Helix 29
29
A
774 778Right-handed 310
Helix 30
30
A
780 817Right-handed alpha
Helix 31
31
A
840 855Right-handed alpha
Helix 32
32
D
308 313Right-handed 310
Helix 33
33
D
347 352Right-handed alpha
Helix 34
34
D
354 363Right-handed alpha
Helix 35
35
D
372 382Right-handed alpha
Helix 36
36
D
394 402Right-handed alpha
Helix 37
37
D
403 406Right-handed 310
Helix 38
38
D
409 416Right-handed alpha
Helix 39
39
D
424 430Right-handed alpha
Helix 40
40
D
431 435Right-handed 310
Helix 41
41
D
439 468Right-handed alpha
Helix 42
42
D
470 477Right-handed alpha
Helix 43
43
D
477 492Right-handed alpha
Helix 44
44
D
496 523Right-handed alpha
Helix 45
45
D
530 540Right-handed alpha
Helix 46
46
D
557 564Right-handed alpha
Helix 47
47
D
569 588Right-handed alpha
Helix 48
48
D
588 593Right-handed alpha
Helix 49
49
D
630 635Right-handed alpha
Helix 50
50
D
636 638Right-handed 310
Helix 51
51
D
656 667Right-handed alpha
Helix 52
52
D
668 677Right-handed alpha
Helix 53
53
D
680 691Right-handed alpha
Helix 54
54
D
693 697Right-handed 310
Helix 55
55
D
698 714Right-handed alpha
Helix 56
56
D
717 726Right-handed alpha
Helix 57
57
D
728 743Right-handed alpha
Helix 58
58
D
743 761Right-handed alpha
Helix 59
59
D
774 778Right-handed 310
Helix 60
60
D
780 818Right-handed alpha
Helix 61
61
D
840 854Right-handed alpha
Helix 62
62
D
871 876Right-handed alpha
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There are 11 sheets in PDB entry 2HVH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 303first strand
Strand 2
A
342 346parallel
Strand 3
A
332 339anti-parallel
Strand 4
A
315 322anti-parallel
Strand 5
A
367 370parallel
Strand 6
A
390 393parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
601 602first strand
Strand 2
A
493 495anti-parallel
Strand 3
A
640 641anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
605 607first strand
Strand 2
A
617 619anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
823 827first strand
Strand 2
A
831 837anti-parallel
Strand 3
A
647 654anti-parallel
Strand 4
A
864 869anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
762 764first strand
Strand 2
A
770 772anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
302 304first strand
Strand 2
D
342 346parallel
Strand 3
D
334 339anti-parallel
Strand 4
D
315 321anti-parallel
Strand 5
D
367 370parallel
Strand 6
D
390 393parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
601 602first strand
Strand 2
D
493 495anti-parallel
Strand 3
D
640 641anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
549 550first strand
Strand 2
D
553 554anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
605 607first strand
Strand 2
D
617 619anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
823 827first strand
Strand 2
D
831 837anti-parallel
Strand 3
D
647 654anti-parallel
Strand 4
D
864 869anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
762 764first strand
Strand 2
D
770 772anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il