Analysis of interatomic Contacts of Structural Units in PDB entry:
2HZP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2HZP entry

There are 2 chains in PDB entry 2HZP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6GLU 44
A
 PHE 46SER 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 2HZP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 21Right-handed alpha
Helix 2
2
A
26 37Right-handed alpha
Helix 3
3
A
39 44Right-handed 310
Helix 4
4
A
50 54Right-handed 310
Helix 5
5
A
82 98Right-handed alpha
Helix 6
6
A
99 103Right-handed 310
Helix 7
7
A
108 112Right-handed 310
Helix 8
8
A
116 119Right-handed 310
Helix 9
9
A
120 125Right-handed alpha
Helix 10
10
A
127 129Right-handed 310
Helix 11
11
A
136 149Right-handed alpha
Helix 12
12
A
165 179Right-handed alpha
Helix 13
13
A
182 186Right-handed alpha
Helix 14
14
A
200 212Right-handed alpha
Helix 15
15
A
232 243Right-handed alpha
Helix 16
16
A
261 266Right-handed alpha
Helix 17
17
A
292 295Right-handed 310
Helix 18
18
A
304 308Right-handed 310
Helix 19
19
A
309 314Right-handed alpha
Helix 20
20
A
325 330Right-handed 310
Helix 21
21
A
335 353Right-handed alpha
Helix 22
22
A
353 376Right-handed alpha
Helix 23
23
A
395 399Right-handed 310
Helix 24
24
A
413 420Right-handed alpha
Helix 25
25
A
443 459Right-handed alpha
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There are 4 sheets in PDB entry 2HZP. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
79 80anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
423 424parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
287 290anti-parallel
Strand 3
A
269 272anti-parallel
Strand 4
A
246 250parallel
Strand 5
A
215 221parallel
Strand 6
A
157 161parallel
Strand 7
A
187 190parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 390first strand
Strand 2
A
403 407anti-parallel
Strand 3
A
432 435anti-parallel
Strand 4
A
426 428anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il