Analysis of interatomic Contacts of Structural Units in PDB entry:
2IE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2IE8 entry

There is 1 chain in PDB entry 2IE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 1GLY 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 2IE8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 7Right-handed 310
Helix 2
2
A
32 48Right-handed alpha
Helix 3
3
A
65 69Right-handed 310
Helix 4
4
A
70 81Right-handed alpha
Helix 5
5
A
93 102Right-handed alpha
Helix 6
6
A
113 117Right-handed 310
Helix 7
7
A
124 133Right-handed alpha
Helix 8
8
A
142 146Right-handed 310
Helix 9
9
A
155 159Right-handed 310
Helix 10
10
A
165 178Right-handed alpha
Helix 11
11
A
194 197Right-handed 310
Helix 12
12
A
198 206Right-handed alpha
Helix 13
13
A
207 209Right-handed 310
Helix 14
14
A
217 226Right-handed alpha
Helix 15
15
A
236 238Right-handed 310
Helix 16
16
A
239 253Right-handed alpha
Helix 17
17
A
293 305Right-handed alpha
Helix 18
18
A
321 324Right-handed 310
Helix 19
19
A
325 338Right-handed alpha
Helix 20
20
A
347 357Right-handed alpha
Helix 21
21
A
359 363Right-handed 310
Helix 22
22
A
370 380Right-handed alpha
Helix 23
23
A
382 387Right-handed alpha
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There are 3 sheets in PDB entry 2IE8. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
A
108 110parallel
Strand 3
A
51 55parallel
Strand 4
A
13 17parallel
Strand 5
A
137 140parallel
Strand 6
A
162 164parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 258first strand
Strand 2
A
211 215parallel
Strand 3
A
186 191parallel
Strand 4
A
309 313parallel
Strand 5
A
342 346parallel
Strand 6
A
365 366parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 279first strand
Strand 2
A
262 266anti-parallel
Strand 3
A
288 292anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il