Analysis of interatomic Contacts of Structural Units in PDB entry:
2II0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2II0 entry

There is 1 chain in PDB entry 2II0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 566PRO 1045
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 2II0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
575 579Right-handed 310
Helix 2
2
A
605 614Right-handed alpha
Helix 3
3
A
620 631Right-handed alpha
Helix 4
4
A
632 634Right-handed 310
Helix 5
5
A
636 649Right-handed alpha
Helix 6
6
A
656 665Right-handed alpha
Helix 7
7
A
671 681Right-handed alpha
Helix 8
8
A
681 700Right-handed alpha
Helix 9
9
A
701 707Right-handed alpha
Helix 10
10
A
707 719Right-handed alpha
Helix 11
11
A
726 743Right-handed alpha
Helix 12
12
A
770 774Right-handed 310
Helix 13
13
A
780 799Right-handed alpha
Helix 14
14
A
800 811Right-handed 310
Helix 15
15
A
813 818Right-handed alpha
Helix 16
16
A
818 841Right-handed alpha
Helix 17
17
A
844 865Right-handed alpha
Helix 18
18
A
867 879Right-handed alpha
Helix 19
19
A
880 885Right-handed alpha
Helix 20
20
A
886 893Right-handed alpha
Helix 21
21
A
894 921Right-handed alpha
Helix 22
22
A
930 943Right-handed alpha
Helix 23
23
A
958 972Right-handed alpha
Helix 24
24
A
973 975Right-handed 310
Helix 25
25
A
984 993Right-handed alpha
Helix 26
26
A
1001 1017Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2II0.

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
586 588first strand
Strand 2
A
601 604anti-parallel
Strand 3
A
953 957anti-parallel
Strand 4
A
947 950anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il