Analysis of interatomic Contacts of Structural Units in PDB entry:
2J4A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J4A entry

There is 1 chain in PDB entry 2J4A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 211ASP 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2J4A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
215 233Right-handed alpha
Helix 2
2
A
238 243Right-handed alpha
Helix 3
3
A
265 288Right-handed alpha
Helix 4
4
A
290 295Right-handed alpha
Helix 5
5
A
297 319Right-handed alpha
Helix 6
6
A
338 344Right-handed alpha
Helix 7
7
A
347 361Right-handed alpha
Helix 8
8
A
366 379Right-handed alpha
Helix 9
9
A
388 411Right-handed alpha
Helix 10
10
A
416 446Right-handed alpha
Helix 11
11
A
447 451Right-handed 310
Helix 12
12
A
452 460Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2J4A.

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 245first strand
Strand 2
A
334 337parallel
Strand 3
A
327 330anti-parallel
Strand 4
A
321 322anti-parallel
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