Analysis of interatomic Contacts of Structural Units in PDB entry:
2JQY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JQY entry

There is 1 chain in PDB entry 2JQY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1PHE 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 2JQY

There are 2 sheets in PDB entry 2JQY. Click on sheet of interest to get list of strands forming it: A, B,

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
118 121anti-parallel
Strand 3
A
126 138anti-parallel
Strand 4
A
109 114anti-parallel
Strand 5
A
88 94anti-parallel
Strand 6
A
68 74anti-parallel
Strand 7
A
43 50anti-parallel
Strand 8
A
33 40anti-parallel
Strand 9
A
7 14anti-parallel
Strand 10
A
273 280anti-parallel
Strand 11
A
249 254anti-parallel
Strand 12
A
237 243anti-parallel
Strand 13
A
205 210anti-parallel
Strand 14
A
199 200anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
118 121anti-parallel
Strand 3
A
126 138anti-parallel
Strand 4
A
150 160anti-parallel
Strand 5
A
166 175anti-parallel
Strand 6
A
189 196anti-parallel
Strand 7
A
205 210anti-parallel
Strand 8
A
199 200anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il