Analysis of interatomic Contacts of Structural Units in PDB entry:
2K0G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2K0G entry

There is 1 chain in PDB entry 2K0G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 214ALA 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2K0G. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
221 231Right-handed alpha
Helix 2
2
A
234 238Right-handed 310
Helix 3
3
A
241 251Right-handed alpha
Helix 4
4
A
299 302Right-handed alpha
Helix 5
5
A
324 333Right-handed alpha
Helix 6
6
A
335 349Right-handed alpha
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There are 2 sheets in PDB entry 2K0G. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
252 256first strand
Strand 2
A
317 323anti-parallel
Strand 3
A
271 277anti-parallel
Strand 4
A
294 296anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
311 313first strand
Strand 2
A
280 282anti-parallel
Strand 3
A
288 290anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il